Difference between revisions of "SJ06498"
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(Created page with "Category:gene == Gene SJ20325 == * transcription-direction: ** negative * right-end-position: ** 37017 * left-end-position: ** 15277 * centisome-position: ** 7.2994413...") |
(Created page with "Category:gene == Gene SJ14331 == * transcription-direction: ** negative * right-end-position: ** 89365 * left-end-position: ** 78665 * centisome-position: ** 24.64234...") |
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| Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
| − | == Gene | + | == Gene SJ14331 == |
* transcription-direction: | * transcription-direction: | ||
** negative | ** negative | ||
* right-end-position: | * right-end-position: | ||
| − | ** | + | ** 89365 |
* left-end-position: | * left-end-position: | ||
| − | ** | + | ** 78665 |
* centisome-position: | * centisome-position: | ||
| − | ** | + | ** 24.64234 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
| − | + | * [[3-HYDROXYISOBUTYRATE-DEHYDROGENASE-RXN]] | |
| − | * [[ | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
| − | * [[ | + | * [[6PGLUCONDEHYDROG-RXN]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| − | * [[RXN- | + | * [[RXN-9952]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
== Pathway(s) associated == | == Pathway(s) associated == | ||
| − | * [[PWY- | + | * [[VALDEG-PWY]] |
| − | ** ''' | + | ** '''6''' reactions found over '''8''' reactions in the full pathway |
| − | * [[ | + | * [[P122-PWY]] |
| − | ** ''' | + | ** '''16''' reactions found over '''18''' reactions in the full pathway |
| + | * [[OXIDATIVEPENT-PWY]] | ||
| + | ** '''3''' reactions found over '''3''' reactions in the full pathway | ||
{{#set: transcription-direction=negative}} | {{#set: transcription-direction=negative}} | ||
| − | {{#set: right-end-position= | + | {{#set: right-end-position=89365}} |
| − | {{#set: left-end-position= | + | {{#set: left-end-position=78665}} |
| − | {{#set: centisome-position= | + | {{#set: centisome-position=24.64234 }} |
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
| − | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=3}} |
| − | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=3}} |
Revision as of 08:19, 15 March 2021
Contents
Gene SJ14331
- transcription-direction:
- negative
- right-end-position:
- 89365
- left-end-position:
- 78665
- centisome-position:
- 24.64234
Organism(s) associated with this gene
Reaction(s) associated
- 3-HYDROXYISOBUTYRATE-DEHYDROGENASE-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
- 6PGLUCONDEHYDROG-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-9952
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
Pathway(s) associated
- VALDEG-PWY
- 6 reactions found over 8 reactions in the full pathway
- P122-PWY
- 16 reactions found over 18 reactions in the full pathway
- OXIDATIVEPENT-PWY
- 3 reactions found over 3 reactions in the full pathway
