Difference between revisions of "SJ06533"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:gene == Gene SJ11453 == * transcription-direction: ** positive * right-end-position: ** 353745 * left-end-position: ** 323765 * centisome-position: ** 87.03640...")
(Created page with "Category:gene == Gene SJ06533 == * transcription-direction: ** positive * right-end-position: ** 21433 * left-end-position: ** 19436 * centisome-position: ** 24.949295...")
 
(8 intermediate revisions by 4 users not shown)
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ11453 ==
+
== Gene SJ06533 ==
 
* transcription-direction:
 
* transcription-direction:
 
** positive
 
** positive
 
* right-end-position:
 
* right-end-position:
−
** 353745
+
** 21433
 
* left-end-position:
 
* left-end-position:
−
** 323765
+
** 19436
 
* centisome-position:
 
* centisome-position:
−
** 87.03640    
+
** 24.949295    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[MONOPHENOL-MONOOXYGENASE-RXN]]
−
* [[ATPASE-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
* [[RXN-13061]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
* [[RXN-5861]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-11135]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-12195]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-12196]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN0-5462]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
</div>
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-7210]]
+
* [[PWY-7917]]
−
** '''8''' reactions found over '''8''' reactions in the full pathway
+
** '''1''' reactions found over '''8''' reactions in the full pathway
−
* [[PWY-7198]]
+
* [[PWY-6481]]
−
** '''6''' reactions found over '''7''' reactions in the full pathway
+
** '''1''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY-7184]]
+
* [[PWY-5399]]
−
** '''9''' reactions found over '''9''' reactions in the full pathway
+
** '''2''' reactions found over '''8''' reactions in the full pathway
−
* [[PWY-6545]]
+
* [[PWY-6955]]
−
** '''8''' reactions found over '''9''' reactions in the full pathway
+
** '''1''' reactions found over '''27''' reactions in the full pathway
 +
* [[PWY-6133]]
 +
** '''2''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-3581]]
 +
** '''6''' reactions found over '''11''' reactions in the full pathway
 
{{#set: transcription-direction=positive}}
 
{{#set: transcription-direction=positive}}
−
{{#set: right-end-position=353745}}
+
{{#set: right-end-position=21433}}
−
{{#set: left-end-position=323765}}
+
{{#set: left-end-position=19436}}
−
{{#set: centisome-position=87.03640   }}
+
{{#set: centisome-position=24.949295   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=6}}
+
{{#set: nb reaction associated=3}}
−
{{#set: nb pathway associated=4}}
+
{{#set: nb pathway associated=6}}

Latest revision as of 11:07, 18 March 2021

Gene SJ06533

  • transcription-direction:
    • positive
  • right-end-position:
    • 21433
  • left-end-position:
    • 19436
  • centisome-position:
    • 24.949295

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7917
    • 1 reactions found over 8 reactions in the full pathway
  • PWY-6481
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-5399
    • 2 reactions found over 8 reactions in the full pathway
  • PWY-6955
    • 1 reactions found over 27 reactions in the full pathway
  • PWY-6133
    • 2 reactions found over 7 reactions in the full pathway
  • PWY-3581
    • 6 reactions found over 11 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ06533&oldid=134759"