Difference between revisions of "SJ06572"

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(Created page with "Category:gene == Gene SJ06572 == * transcription-direction: ** negative * right-end-position: ** 60008 * left-end-position: ** 15418 * centisome-position: ** 19.8185 =...")
(Created page with "Category:gene == Gene SJ02816 == * transcription-direction: ** positive * right-end-position: ** 908096 * left-end-position: ** 902717 * centisome-position: ** 83.21867...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ06572 ==
+
== Gene SJ02816 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 60008
+
** 908096
 
* left-end-position:
 
* left-end-position:
−
** 15418
+
** 902717
 
* centisome-position:
 
* centisome-position:
−
** 19.8185    
+
** 83.21867    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[4-NITROPHENYLPHOSPHATASE-RXN]]
+
* [[OROPRIBTRANS-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[POLYNUCLEOTIDE-3-PHOSPHATASE-RXN]]
+
** Category: [[orthology]]
−
** Category: [[annotation]]
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* [[OROTPDECARB-RXN]]
−
* [[POLYNUCLEOTIDE-5-HYDROXYL-KINASE-RXN]]
+
** Category: [[orthology]]
−
** Category: [[annotation]]
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* [[ORPDC]]
−
{{#set: transcription-direction=negative}}
+
** Category: [[orthology]]
−
{{#set: right-end-position=60008}}
+
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
−
{{#set: left-end-position=15418}}
+
* [[ORPRT]]
−
{{#set: centisome-position=19.8185   }}
+
** Category: [[orthology]]
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
== Pathway(s) associated ==
 +
* [[PWY-7791]]
 +
** '''5''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-7790]]
 +
** '''5''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-5686]]
 +
** '''6''' reactions found over '''6''' reactions in the full pathway
 +
{{#set: transcription-direction=positive}}
 +
{{#set: right-end-position=908096}}
 +
{{#set: left-end-position=902717}}
 +
{{#set: centisome-position=83.21867   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=3}}
+
{{#set: nb reaction associated=4}}
 +
{{#set: nb pathway associated=3}}

Revision as of 15:19, 5 January 2021

Gene SJ02816

  • transcription-direction:
    • positive
  • right-end-position:
    • 908096
  • left-end-position:
    • 902717
  • centisome-position:
    • 83.21867

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7791
    • 5 reactions found over 6 reactions in the full pathway
  • PWY-7790
    • 5 reactions found over 6 reactions in the full pathway
  • PWY-5686
    • 6 reactions found over 6 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ06572&oldid=68817"