Difference between revisions of "SJ06622"

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(Created page with "Category:gene == Gene SJ02214 == * transcription-direction: ** positive * right-end-position: ** 96011 * left-end-position: ** 55580 * centisome-position: ** 39.7017 =...")
(Created page with "Category:gene == Gene SJ18000 == * transcription-direction: ** negative * right-end-position: ** 332745 * left-end-position: ** 313555 * centisome-position: ** 47.76678...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ02214 ==
+
== Gene SJ18000 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 96011
+
** 332745
 
* left-end-position:
 
* left-end-position:
−
** 55580
+
** 313555
 
* centisome-position:
 
* centisome-position:
−
** 39.7017    
+
** 47.76678    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[ACETYL-COA-CARBOXYLTRANSFER-RXN]]
+
* [[ATPASE-RXN]]
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[BIOTIN-CARBOXYL-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[DALADALALIG-RXN]]
+
* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[METHYLCROTONYL-COA-CARBOXYLASE-RXN]]
+
* [[RXN-12195]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-12196]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN0-5462]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[PWY-7210]]
−
* [[PWY-7388]]
+
** '''8''' reactions found over '''8''' reactions in the full pathway
−
** '''7''' reactions found over '''11''' reactions in the full pathway
+
* [[PWY-7198]]
−
* [[PWY-6679]]
+
** '''6''' reactions found over '''7''' reactions in the full pathway
−
** '''1''' reactions found over '''9''' reactions in the full pathway
+
* [[PWY-7184]]
−
* [[PWY-5744]]
+
** '''9''' reactions found over '''9''' reactions in the full pathway
−
** '''4''' reactions found over '''13''' reactions in the full pathway
+
* [[PWY-6545]]
−
* [[PWY-5743]]
+
** '''8''' reactions found over '''9''' reactions in the full pathway
−
** '''5''' reactions found over '''13''' reactions in the full pathway
+
{{#set: transcription-direction=negative}}
−
* [[PWY-5789]]
+
{{#set: right-end-position=332745}}
−
** '''8''' reactions found over '''18''' reactions in the full pathway
+
{{#set: left-end-position=313555}}
−
* [[PWY0-1264]]
+
{{#set: centisome-position=47.76678   }}
−
** '''3''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-7953]]
 
−
** '''2''' reactions found over '''8''' reactions in the full pathway
 
−
* [[PWY-6386]]
 
−
** '''2''' reactions found over '''8''' reactions in the full pathway
 
−
* [[PWY-6387]]
 
−
** '''2''' reactions found over '''8''' reactions in the full pathway
 
−
* [[LEU-DEG2-PWY]]
 
−
** '''4''' reactions found over '''6''' reactions in the full pathway
 
−
</div>
 
−
{{#set: transcription-direction=positive}}
 
−
{{#set: right-end-position=96011}}
 
−
{{#set: left-end-position=55580}}
 
−
{{#set: centisome-position=39.7017   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=4}}
+
{{#set: nb reaction associated=5}}
−
{{#set: nb pathway associated=10}}
+
{{#set: nb pathway associated=4}}

Revision as of 11:09, 15 January 2021

Gene SJ18000

  • transcription-direction:
    • negative
  • right-end-position:
    • 332745
  • left-end-position:
    • 313555
  • centisome-position:
    • 47.76678

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7210
    • 8 reactions found over 8 reactions in the full pathway
  • PWY-7198
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-7184
    • 9 reactions found over 9 reactions in the full pathway
  • PWY-6545
    • 8 reactions found over 9 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ06622&oldid=109190"