Difference between revisions of "SJ06625"
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(Created page with "Category:gene == Gene SJ11959 == * transcription-direction: ** positive * right-end-position: ** 58516 * left-end-position: ** 56742 * centisome-position: ** 15.647830...") |
(Created page with "Category:gene == Gene SJ03311 == * transcription-direction: ** negative * right-end-position: ** 303625 * left-end-position: ** 285937 * centisome-position: ** 54.336166...") |
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| Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
| − | == Gene | + | == Gene SJ03311 == |
* transcription-direction: | * transcription-direction: | ||
| − | ** | + | ** negative |
* right-end-position: | * right-end-position: | ||
| − | ** | + | ** 303625 |
* left-end-position: | * left-end-position: | ||
| − | ** | + | ** 285937 |
* centisome-position: | * centisome-position: | ||
| − | ** | + | ** 54.336166 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
| − | * [[ | + | * [[1.1.3.37-RXN]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| − | * [[ | + | * [[L-GULONOLACTONE-OXIDASE-RXN]] |
| + | ** Category: [[annotation]] | ||
| + | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | * [[RXN-13689]] | ||
| + | ** Category: [[annotation]] | ||
| + | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | * [[UDPNACETYLMURAMATEDEHYDROG-RXN]] | ||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
== Pathway(s) associated == | == Pathway(s) associated == | ||
| − | * [[PWY- | + | * [[PWY3O-6]] |
| − | ** '''2''' reactions found over '''3''' reactions in the full pathway | + | ** '''1''' reactions found over '''3''' reactions in the full pathway |
| − | {{#set: transcription-direction= | + | * [[PWY3DJ-35471]] |
| − | {{#set: right-end-position= | + | ** '''3''' reactions found over '''6''' reactions in the full pathway |
| − | {{#set: left-end-position= | + | * [[PWY-6387]] |
| − | {{#set: centisome-position= | + | ** '''2''' reactions found over '''8''' reactions in the full pathway |
| + | * [[PWY0-1261]] | ||
| + | ** '''3''' reactions found over '''12''' reactions in the full pathway | ||
| + | * [[PWY-7953]] | ||
| + | ** '''2''' reactions found over '''8''' reactions in the full pathway | ||
| + | * [[PWY-6386]] | ||
| + | ** '''2''' reactions found over '''8''' reactions in the full pathway | ||
| + | {{#set: transcription-direction=negative}} | ||
| + | {{#set: right-end-position=303625}} | ||
| + | {{#set: left-end-position=285937}} | ||
| + | {{#set: centisome-position=54.336166 }} | ||
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
| − | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=4}} |
| − | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=6}} |
Revision as of 12:58, 14 January 2021
Contents
Gene SJ03311
- transcription-direction:
- negative
- right-end-position:
- 303625
- left-end-position:
- 285937
- centisome-position:
- 54.336166
Organism(s) associated with this gene
Reaction(s) associated
- 1.1.3.37-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- L-GULONOLACTONE-OXIDASE-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-13689
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- UDPNACETYLMURAMATEDEHYDROG-RXN
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: orthology
Pathway(s) associated
- PWY3O-6
- 1 reactions found over 3 reactions in the full pathway
- PWY3DJ-35471
- 3 reactions found over 6 reactions in the full pathway
- PWY-6387
- 2 reactions found over 8 reactions in the full pathway
- PWY0-1261
- 3 reactions found over 12 reactions in the full pathway
- PWY-7953
- 2 reactions found over 8 reactions in the full pathway
- PWY-6386
- 2 reactions found over 8 reactions in the full pathway
