Difference between revisions of "SJ06638"

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(Created page with "Category:gene == Gene SJ05197 == * transcription-direction: ** negative * right-end-position: ** 286464 * left-end-position: ** 271039 * centisome-position: ** 54.148346...")
(Created page with "Category:gene == Gene SJ06638 == * transcription-direction: ** positive * right-end-position: ** 70959 * left-end-position: ** 47038 * centisome-position: ** 61.245007...")
 
(One intermediate revision by the same user not shown)
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[[Category:gene]]
 
[[Category:gene]]
== Gene SJ05197 ==
+
== Gene SJ06638 ==
 
* transcription-direction:
 
* transcription-direction:
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
** 286464
+
** 70959
 
* left-end-position:
 
* left-end-position:
** 271039
+
** 47038
 
* centisome-position:
 
* centisome-position:
** 54.148346    
+
** 61.245007    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
* [[RXN-9839]]
+
* [[3.2.1.39-RXN]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[3.2.1.6-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
== Pathway(s) associated ==
+
** Category: [[orthology]]
* [[PWY-6082]]
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
** '''3''' reactions found over '''7''' reactions in the full pathway
+
{{#set: transcription-direction=positive}}
* [[PWY-6073]]
+
{{#set: right-end-position=70959}}
** '''3''' reactions found over '''3''' reactions in the full pathway
+
{{#set: left-end-position=47038}}
{{#set: transcription-direction=negative}}
+
{{#set: centisome-position=61.245007   }}
{{#set: right-end-position=286464}}
 
{{#set: left-end-position=271039}}
 
{{#set: centisome-position=54.148346   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
{{#set: nb reaction associated=1}}
+
{{#set: nb reaction associated=2}}
{{#set: nb pathway associated=2}}
 

Latest revision as of 11:07, 18 March 2021

Gene SJ06638

  • transcription-direction:
    • positive
  • right-end-position:
    • 70959
  • left-end-position:
    • 47038
  • centisome-position:
    • 61.245007

Organism(s) associated with this gene

Reaction(s) associated