Difference between revisions of "SJ06700"

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(Created page with "Category:gene == Gene SJ21215 == * transcription-direction: ** negative * right-end-position: ** 394354 * left-end-position: ** 382280 * centisome-position: ** 63.617165...")
(Created page with "Category:gene == Gene SJ00717 == * transcription-direction: ** positive * right-end-position: ** 310410 * left-end-position: ** 294546 * centisome-position: ** 52.17054...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
== Gene SJ21215 ==
+
== Gene SJ00717 ==
 
* transcription-direction:
 
* transcription-direction:
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
** 394354
+
** 310410
 
* left-end-position:
 
* left-end-position:
** 382280
+
** 294546
 
* centisome-position:
 
* centisome-position:
** 63.617165    
+
** 52.17054    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
* [[4-NITROPHENYLPHOSPHATASE-RXN]]
+
* [[3.1.3.16-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
* [[ALKAPHOSPHA-RXN]]
+
* [[4-NITROPHENYLPHOSPHATASE-RXN]]
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-5822]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
* [[RXN-8748]]
+
* [[PROTEIN-TYROSINE-PHOSPHATASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
== Pathway(s) associated ==
+
{{#set: transcription-direction=positive}}
* [[NADPHOS-DEPHOS-PWY]]
+
{{#set: right-end-position=310410}}
** '''3''' reactions found over '''3''' reactions in the full pathway
+
{{#set: left-end-position=294546}}
* [[PWY-5083]]
+
{{#set: centisome-position=52.17054   }}
** '''5''' reactions found over '''6''' reactions in the full pathway
 
* [[NAD-BIOSYNTHESIS-II]]
 
** '''4''' reactions found over '''3''' reactions in the full pathway
 
* [[PWY-5491]]
 
** '''1''' reactions found over '''2''' reactions in the full pathway
 
{{#set: transcription-direction=negative}}
 
{{#set: right-end-position=394354}}
 
{{#set: left-end-position=382280}}
 
{{#set: centisome-position=63.617165   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
{{#set: nb reaction associated=4}}
+
{{#set: nb reaction associated=3}}
{{#set: nb pathway associated=4}}
 

Revision as of 18:51, 14 January 2021

Gene SJ00717

  • transcription-direction:
    • positive
  • right-end-position:
    • 310410
  • left-end-position:
    • 294546
  • centisome-position:
    • 52.17054

Organism(s) associated with this gene

Reaction(s) associated