Difference between revisions of "SJ06728"

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(Created page with "Category:gene == Gene SJ13300 == * transcription-direction: ** negative * right-end-position: ** 180413 * left-end-position: ** 155939 * centisome-position: ** 45.459686...")
(Created page with "Category:gene == Gene SJ22422 == * transcription-direction: ** negative * right-end-position: ** 176224 * left-end-position: ** 173305 * centisome-position: ** 98.26106...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ13300 ==
+
== Gene SJ22422 ==
 
* transcription-direction:
 
* transcription-direction:
 
** negative
 
** negative
 
* right-end-position:
 
* right-end-position:
−
** 180413
+
** 176224
 
* left-end-position:
 
* left-end-position:
−
** 155939
+
** 173305
 
* centisome-position:
 
* centisome-position:
−
** 45.459686    
+
** 98.26106    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[SERINE-C-PALMITOYLTRANSFERASE-RXN]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* [[2.7.10.1-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
* [[2.7.11.24-RXN]]
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
+
** Category: [[annotation]]
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
* [[2.7.12.1-RXN]]
−
== Pathway(s) associated ==
+
** Category: [[annotation]]
−
* [[PWY3DJ-12]]
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** '''2''' reactions found over '''4''' reactions in the full pathway
+
* [[2.7.12.2-RXN]]
−
* [[SPHINGOLIPID-SYN-PWY]]
+
** Category: [[annotation]]
−
** '''4''' reactions found over '''11''' reactions in the full pathway
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[PWY-5129]]
+
* [[PROTEIN-KINASE-RXN]]
−
** '''4''' reactions found over '''13''' reactions in the full pathway
+
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-14906]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-16317]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
</div>
 
{{#set: transcription-direction=negative}}
 
{{#set: transcription-direction=negative}}
−
{{#set: right-end-position=180413}}
+
{{#set: right-end-position=176224}}
−
{{#set: left-end-position=155939}}
+
{{#set: left-end-position=173305}}
−
{{#set: centisome-position=45.459686   }}
+
{{#set: centisome-position=98.26106   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=1}}
+
{{#set: nb reaction associated=7}}
−
{{#set: nb pathway associated=3}}
 

Revision as of 13:05, 14 January 2021

Gene SJ22422

  • transcription-direction:
    • negative
  • right-end-position:
    • 176224
  • left-end-position:
    • 173305
  • centisome-position:
    • 98.26106

Organism(s) associated with this gene

Reaction(s) associated




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ06728&oldid=83630"