Difference between revisions of "SJ06815"

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(Created page with "Category:gene == Gene SJ10455 == * transcription-direction: ** negative * right-end-position: ** 320852 * left-end-position: ** 305000 * centisome-position: ** 78.03864...")
(Created page with "Category:gene == Gene SJ06815 == * transcription-direction: ** negative * right-end-position: ** 50302 * left-end-position: ** 36386 * centisome-position: ** 48.66 ==...")
 
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ10455 ==
+
== Gene SJ06815 ==
 
* transcription-direction:
 
* transcription-direction:
 
** negative
 
** negative
 
* right-end-position:
 
* right-end-position:
−
** 320852
+
** 50302
 
* left-end-position:
 
* left-end-position:
−
** 305000
+
** 36386
 
* centisome-position:
 
* centisome-position:
−
** 78.03864    
+
** 48.66    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[METHIONINE--TRNA-LIGASE-RXN]]
+
* [[ALANINE--OXO-ACID-AMINOTRANSFERASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-16165]]
+
* [[ALANINE-AMINOTRANSFERASE-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-13698]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[TRNA-CHARGING-PWY]]
+
* [[PWY-7383]]
−
** '''21''' reactions found over '''21''' reactions in the full pathway
+
** '''4''' reactions found over '''7''' reactions in the full pathway
 +
* [[ALANINE-SYN2-PWY]]
 +
** '''1''' reactions found over '''1''' reactions in the full pathway
 +
* [[ALANINE-DEG3-PWY]]
 +
** '''1''' reactions found over '''1''' reactions in the full pathway
 +
* [[ALACAT2-PWY]]
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-7117]]
 +
** '''10''' reactions found over '''14''' reactions in the full pathway
 +
* [[PWY-7115]]
 +
** '''9''' reactions found over '''11''' reactions in the full pathway
 
{{#set: transcription-direction=negative}}
 
{{#set: transcription-direction=negative}}
−
{{#set: right-end-position=320852}}
+
{{#set: right-end-position=50302}}
−
{{#set: left-end-position=305000}}
+
{{#set: left-end-position=36386}}
−
{{#set: centisome-position=78.03864   }}
+
{{#set: centisome-position=48.66   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=2}}
+
{{#set: nb reaction associated=3}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=6}}

Latest revision as of 11:02, 18 March 2021

Gene SJ06815

  • transcription-direction:
    • negative
  • right-end-position:
    • 50302
  • left-end-position:
    • 36386
  • centisome-position:
    • 48.66

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7383
    • 4 reactions found over 7 reactions in the full pathway
  • ALANINE-SYN2-PWY
    • 1 reactions found over 1 reactions in the full pathway
  • ALANINE-DEG3-PWY
    • 1 reactions found over 1 reactions in the full pathway
  • ALACAT2-PWY
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-7117
    • 10 reactions found over 14 reactions in the full pathway
  • PWY-7115
    • 9 reactions found over 11 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ06815&oldid=132380"