Difference between revisions of "SJ06893"

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(Created page with "Category:gene == Gene SJ07682 == * transcription-direction: ** positive * right-end-position: ** 384202 * left-end-position: ** 369479 * centisome-position: ** 82.35295...")
(Created page with "Category:gene == Gene SJ06893 == * transcription-direction: ** negative * right-end-position: ** 101986 * left-end-position: ** 88980 * centisome-position: ** 18.98795...")
 
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ07682 ==
+
== Gene SJ06893 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 384202
+
** 101986
 
* left-end-position:
 
* left-end-position:
−
** 369479
+
** 88980
 
* centisome-position:
 
* centisome-position:
−
** 82.35295    
+
** 18.98795    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
−
* [[S.japonica_sterols_curated]]
+
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[PHOSACETYLTRANS-RXN]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* [[3.6.4.5-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[ATPASE-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-12195]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-12196]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN0-5462]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
</div>
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[PWY-6545]]
−
* [[PWY-5482]]
+
** '''8''' reactions found over '''9''' reactions in the full pathway
−
** '''2''' reactions found over '''3''' reactions in the full pathway
+
* [[PWY-7210]]
−
* [[PWY0-1312]]
+
** '''8''' reactions found over '''8''' reactions in the full pathway
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
* [[PWY-7198]]
−
* [[P122-PWY]]
+
** '''6''' reactions found over '''7''' reactions in the full pathway
−
** '''16''' reactions found over '''18''' reactions in the full pathway
+
* [[PWY-7184]]
−
* [[P163-PWY]]
+
** '''9''' reactions found over '''9''' reactions in the full pathway
−
** '''3''' reactions found over '''10''' reactions in the full pathway
+
{{#set: transcription-direction=negative}}
−
* [[PWY-5485]]
+
{{#set: right-end-position=101986}}
−
** '''2''' reactions found over '''3''' reactions in the full pathway
+
{{#set: left-end-position=88980}}
−
* [[FERMENTATION-PWY]]
+
{{#set: centisome-position=18.98795   }}
−
** '''11''' reactions found over '''16''' reactions in the full pathway
+
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
* [[P3-PWY]]
+
{{#set: nb reaction associated=6}}
−
** '''3''' reactions found over '''11''' reactions in the full pathway
+
{{#set: nb pathway associated=4}}
−
* [[PWY4LZ-257]]
 
−
** '''7''' reactions found over '''7''' reactions in the full pathway
 
−
* [[METH-ACETATE-PWY]]
 
−
** '''1''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-1281]]
 
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY-6637]]
 
−
** '''1''' reactions found over '''4''' reactions in the full pathway
 
−
* [[P161-PWY]]
 
−
** '''2''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-5497]]
 
−
** '''10''' reactions found over '''24''' reactions in the full pathway
 
−
</div>
 
−
{{#set: transcription-direction=positive}}
 
−
{{#set: right-end-position=384202}}
 
−
{{#set: left-end-position=369479}}
 
−
{{#set: centisome-position=82.35295   }}
 
−
{{#set: organism associated=S.japonica_sterols_curated}}
 
−
{{#set: nb reaction associated=1}}
 
−
{{#set: nb pathway associated=13}}
 

Latest revision as of 11:04, 18 March 2021

Gene SJ06893

  • transcription-direction:
    • negative
  • right-end-position:
    • 101986
  • left-end-position:
    • 88980
  • centisome-position:
    • 18.98795

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6545
    • 8 reactions found over 9 reactions in the full pathway
  • PWY-7210
    • 8 reactions found over 8 reactions in the full pathway
  • PWY-7198
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-7184
    • 9 reactions found over 9 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ06893&oldid=133508"