Difference between revisions of "SJ06925"

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(Created page with "Category:gene == Gene SJ10400 == * transcription-direction: ** negative * right-end-position: ** 8152 * left-end-position: ** 1899 * centisome-position: ** 6.221538 ==...")
(Created page with "Category:gene == Gene SJ11072 == * transcription-direction: ** positive * right-end-position: ** 27644 * left-end-position: ** 19488 * centisome-position: ** 5.1224494...")
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ10400 ==
+
== Gene SJ11072 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 8152
+
** 27644
 
* left-end-position:
 
* left-end-position:
−
** 1899
+
** 19488
 
* centisome-position:
 
* centisome-position:
−
** 6.221538    
+
** 5.1224494    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[ADDALT-RXN]]
−
* [[1.1.1.145-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-12693]]
+
* [[ADENODEAMIN-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-12747]]
+
* [[RXN-13996]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-12789]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN66-342]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN66-350]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN66-353]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[UDP-GLUCURONATE-4-EPIMERASE-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
</div>
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-6946]]
+
* [[PWY-7179-1]]
−
** '''6''' reactions found over '''22''' reactions in the full pathway
+
** '''3''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY-6944]]
+
* [[PWY-7179]]
−
** '''2''' reactions found over '''25''' reactions in the full pathway
+
** '''4''' reactions found over '''4''' reactions in the full pathway
−
* [[PWY-6948]]
+
* [[PWY-6611]]
−
** '''2''' reactions found over '''18''' reactions in the full pathway
+
** '''2''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY66-378]]
+
* [[SALVADEHYPOX-PWY]]
−
** '''3''' reactions found over '''6''' reactions in the full pathway
+
** '''5''' reactions found over '''5''' reactions in the full pathway
−
* [[PWY-7299]]
+
* [[PWY-6609]]
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
** '''4''' reactions found over '''4''' reactions in the full pathway
−
* [[PWY-4861]]
+
* [[PWY0-1296]]
−
** '''1''' reactions found over '''1''' reactions in the full pathway
+
** '''6''' reactions found over '''6''' reactions in the full pathway
−
* [[PWY-6415]]
+
{{#set: transcription-direction=positive}}
−
** '''4''' reactions found over '''7''' reactions in the full pathway
+
{{#set: right-end-position=27644}}
−
{{#set: transcription-direction=negative}}
+
{{#set: left-end-position=19488}}
−
{{#set: right-end-position=8152}}
+
{{#set: centisome-position=5.1224494   }}
−
{{#set: left-end-position=1899}}
 
−
{{#set: centisome-position=6.221538   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=8}}
+
{{#set: nb reaction associated=3}}
−
{{#set: nb pathway associated=7}}
+
{{#set: nb pathway associated=6}}

Revision as of 18:50, 14 January 2021

Gene SJ11072

  • transcription-direction:
    • positive
  • right-end-position:
    • 27644
  • left-end-position:
    • 19488
  • centisome-position:
    • 5.1224494

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7179-1
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-7179
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-6611
    • 2 reactions found over 3 reactions in the full pathway
  • SALVADEHYPOX-PWY
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-6609
    • 4 reactions found over 4 reactions in the full pathway
  • PWY0-1296
    • 6 reactions found over 6 reactions in the full pathway




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