Difference between revisions of "SJ06935"

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(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=SER SER] == * common-name: ** l-serine * smiles: ** c(o)c([n+])c(=o)[o-] * inchi-key: ** mtcfgr...")
(Created page with "Category:gene == Gene SJ16216 == * transcription-direction: ** positive * right-end-position: ** 216214 * left-end-position: ** 207656 * centisome-position: ** 72.567665...")
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[[Category:metabolite]]
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[[Category:gene]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=SER SER] ==
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== Gene SJ16216 ==
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* common-name:
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* transcription-direction:
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** l-serine
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** positive
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* smiles:
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* right-end-position:
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** c(o)c([n+])c(=o)[o-]
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** 216214
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* inchi-key:
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* left-end-position:
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** mtcfgrxmjlqnbg-reohclbhsa-n
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** 207656
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* molecular-weight:
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* centisome-position:
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** 105.093
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** 72.567665   
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== Reaction(s) known to consume the compound ==
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== Organism(s) associated with this gene  ==
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* [[4.3.1.17-RXN]]
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* [[S.japonica_sterols_curated]]
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* [[5.1.1.18-RXN]]
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== Reaction(s) associated ==
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* [[CYSTATHIONINE-BETA-SYNTHASE-RXN]]
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* [[ATPASE-RXN]]
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* [[GLYOHMETRANS-RXN]]
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** Category: [[annotation]]
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* [[PHOSPHASERSYN-RXN]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-1382]]
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* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
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* [[RXN-15125]]
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** Category: [[annotation]]
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* [[RXN0-2161]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN0-2382]]
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* [[RXN-12195]]
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* [[SERINE--TRNA-LIGASE-RXN]]
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** Category: [[annotation]]
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* [[SERINE-C-PALMITOYLTRANSFERASE-RXN]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[SERINE-O-ACETTRAN-RXN]]
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* [[RXN-12196]]
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* [[TRYPSYN-RXN]]
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** Category: [[annotation]]
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* [[biomass_rxn]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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== Reaction(s) known to produce the compound ==
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* [[RXN0-5462]]
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* [[CYSTATHIONINE-BETA-SYNTHASE-RXN]]
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** Category: [[annotation]]
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* [[GLYOHMETRANS-RXN]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[PHOSPHASERSYN-RXN]]
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== Pathway(s) associated ==
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* [[RXN-1382]]
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* [[PWY-6545]]
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* [[RXN-14136]]
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** '''8''' reactions found over '''9''' reactions in the full pathway
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* [[RXN0-5114]]
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* [[PWY-7210]]
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== Reaction(s) of unknown directionality ==
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** '''8''' reactions found over '''8''' reactions in the full pathway
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{{#set: common-name=l-serine}}
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* [[PWY-7198]]
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{{#set: inchi-key=inchikey=mtcfgrxmjlqnbg-reohclbhsa-n}}
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** '''6''' reactions found over '''7''' reactions in the full pathway
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{{#set: molecular-weight=105.093}}
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* [[PWY-7184]]
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** '''9''' reactions found over '''9''' reactions in the full pathway
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{{#set: transcription-direction=positive}}
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{{#set: right-end-position=216214}}
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{{#set: left-end-position=207656}}
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{{#set: centisome-position=72.567665    }}
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{{#set: organism associated=S.japonica_sterols_curated}}
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{{#set: nb reaction associated=5}}
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{{#set: nb pathway associated=4}}

Revision as of 20:23, 18 December 2020

Gene SJ16216

  • transcription-direction:
    • positive
  • right-end-position:
    • 216214
  • left-end-position:
    • 207656
  • centisome-position:
    • 72.567665

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6545
    • 8 reactions found over 9 reactions in the full pathway
  • PWY-7210
    • 8 reactions found over 8 reactions in the full pathway
  • PWY-7198
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-7184
    • 9 reactions found over 9 reactions in the full pathway




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