Difference between revisions of "SJ06954"

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(Created page with "Category:gene == Gene SJ18979 == * transcription-direction: ** negative * right-end-position: ** 187691 * left-end-position: ** 179025 * centisome-position: ** 76.74682...")
 
(Created page with "Category:gene == Gene SJ06954 == * transcription-direction: ** negative * right-end-position: ** 67463 * left-end-position: ** 52520 * centisome-position: ** 72.608635...")
 
(9 intermediate revisions by 5 users not shown)
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ18979 ==
+
== Gene SJ06954 ==
 
* transcription-direction:
 
* transcription-direction:
 
** negative
 
** negative
 
* right-end-position:
 
* right-end-position:
−
** 187691
+
** 67463
 
* left-end-position:
 
* left-end-position:
−
** 179025
+
** 52520
 
* centisome-position:
 
* centisome-position:
−
** 76.74682    
+
** 72.608635    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
* [[4-NITROPHENYLPHOSPHATASE-RXN]]
+
* [[2.7.7.11-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[MYO-INOSITOL-1OR-4-MONOPHOSPHATASE-RXN]]
+
* [[2.7.7.44-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
* [[2.7.7.64-RXN]]
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-10949]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-10952]]
+
* [[GLUC1PURIDYLTRANS-RXN]]
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-10953]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-10954]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-7253]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[RXN0-5408]]
+
* [[UMPU]]
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXNQT-4142]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
−
* [[SUGAR-PHOSPHATASE-RXN]]
+
* [[UTPHEXPURIDYLYLTRANS-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
</div>
 
</div>
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-2301]]
+
* [[PWY-4841]]
 +
** '''2''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-7817]]
 +
** '''6''' reactions found over '''16''' reactions in the full pathway
 +
* [[PWY-7238]]
 +
** '''5''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-6527]]
 +
** '''7''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-3801]]
 +
** '''4''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-7343]]
 
** '''2''' reactions found over '''2''' reactions in the full pathway
 
** '''2''' reactions found over '''2''' reactions in the full pathway
−
* [[PWY-6363]]
+
* [[PWY-3821]]
 
** '''3''' reactions found over '''3''' reactions in the full pathway
 
** '''3''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY-4702]]
 
−
** '''3''' reactions found over '''14''' reactions in the full pathway
 
−
* [[PWY-882]]
 
−
** '''6''' reactions found over '''8''' reactions in the full pathway
 
 
{{#set: transcription-direction=negative}}
 
{{#set: transcription-direction=negative}}
−
{{#set: right-end-position=187691}}
+
{{#set: right-end-position=67463}}
−
{{#set: left-end-position=179025}}
+
{{#set: left-end-position=52520}}
−
{{#set: centisome-position=76.74682   }}
+
{{#set: centisome-position=72.608635   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=10}}
+
{{#set: nb reaction associated=6}}
−
{{#set: nb pathway associated=4}}
+
{{#set: nb pathway associated=7}}

Latest revision as of 11:10, 18 March 2021

Gene SJ06954

  • transcription-direction:
    • negative
  • right-end-position:
    • 67463
  • left-end-position:
    • 52520
  • centisome-position:
    • 72.608635

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-4841
    • 2 reactions found over 4 reactions in the full pathway
  • PWY-7817
    • 6 reactions found over 16 reactions in the full pathway
  • PWY-7238
    • 5 reactions found over 8 reactions in the full pathway
  • PWY-6527
    • 7 reactions found over 7 reactions in the full pathway
  • PWY-3801
    • 4 reactions found over 5 reactions in the full pathway
  • PWY-7343
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-3821
    • 3 reactions found over 3 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ06954&oldid=136383"