Difference between revisions of "SJ06984"

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(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=3-P-SERINE 3-P-SERINE] == * common-name: ** 3-phospho-l-serine * smiles: ** c(op([o-])([o-])=o)...")
(Created page with "Category:gene == Gene SJ01270 == * transcription-direction: ** negative * right-end-position: ** 130249 * left-end-position: ** 126589 * centisome-position: ** 82.608864...")
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[[Category:metabolite]]
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[[Category:gene]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=3-P-SERINE 3-P-SERINE] ==
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== Gene SJ01270 ==
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* common-name:
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* transcription-direction:
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** 3-phospho-l-serine
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** negative
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* smiles:
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* right-end-position:
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** c(op([o-])([o-])=o)c([n+])c(=o)[o-]
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** 130249
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* inchi-key:
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* left-end-position:
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** bzqfbwgglxlepq-reohclbhsa-l
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** 126589
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* molecular-weight:
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* centisome-position:
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** 183.057
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** 82.608864   
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== Reaction(s) known to consume the compound ==
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== Organism(s) associated with this gene  ==
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* [[PSERTRANSAM-RXN]]
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* [[S.japonica_sterols_curated]]
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* [[RXN0-5114]]
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== Reaction(s) associated ==
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== Reaction(s) known to produce the compound ==
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* [[1.1.1.141-RXN]]
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* [[PSERTRANSAM-RXN]]
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** Category: [[annotation]]
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== Reaction(s) of unknown directionality ==
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: common-name=3-phospho-l-serine}}
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* [[ATPASE-RXN]]
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{{#set: inchi-key=inchikey=bzqfbwgglxlepq-reohclbhsa-l}}
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** Category: [[annotation]]
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{{#set: molecular-weight=183.057}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-12195]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-12196]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN0-5462]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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== Pathway(s) associated ==
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* [[PWY-6545]]
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** '''8''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-7210]]
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** '''8''' reactions found over '''8''' reactions in the full pathway
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* [[PWY-7198]]
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** '''6''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-7184]]
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** '''9''' reactions found over '''9''' reactions in the full pathway
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{{#set: transcription-direction=negative}}
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{{#set: right-end-position=130249}}
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{{#set: left-end-position=126589}}
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{{#set: centisome-position=82.608864    }}
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{{#set: organism associated=S.japonica_sterols_curated}}
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{{#set: nb reaction associated=6}}
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{{#set: nb pathway associated=4}}

Revision as of 20:21, 18 December 2020

Gene SJ01270

  • transcription-direction:
    • negative
  • right-end-position:
    • 130249
  • left-end-position:
    • 126589
  • centisome-position:
    • 82.608864

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6545
    • 8 reactions found over 9 reactions in the full pathway
  • PWY-7210
    • 8 reactions found over 8 reactions in the full pathway
  • PWY-7198
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-7184
    • 9 reactions found over 9 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ06984&oldid=41375"