Difference between revisions of "SJ07027"

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(Created page with "Category:gene == Gene SJ17788 == * transcription-direction: ** negative * right-end-position: ** 88228 * left-end-position: ** 77118 * centisome-position: ** 30.148596...")
(Created page with "Category:gene == Gene SJ07027 == * transcription-direction: ** positive * right-end-position: ** 278993 * left-end-position: ** 247082 * centisome-position: ** 53.03122...")
 
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ17788 ==
+
== Gene SJ07027 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 88228
+
** 278993
 
* left-end-position:
 
* left-end-position:
−
** 77118
+
** 247082
 
* centisome-position:
 
* centisome-position:
−
** 30.148596    
+
** 53.03122    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[4-NITROPHENYLPHOSPHATASE-RXN]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* [[3.1.1.64-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[ACID-PHOSPHATASE-RXN]]
+
* [[6PGLUCONOLACT-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-5822]]
+
* [[CARBOXYLESTERASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RETINYL-PALMITATE-ESTERASE-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-10711]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-10767]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-12252]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-12575]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXNQT-4366]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
</div>
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-6348]]
+
* [[GLYCOLYSIS-E-D]]
−
** '''1''' reactions found over '''1''' reactions in the full pathway
+
** '''4''' reactions found over '''2''' reactions in the full pathway
−
* [[NADPHOS-DEPHOS-PWY]]
+
* [[OXIDATIVEPENT-PWY]]
 
** '''3''' reactions found over '''3''' reactions in the full pathway
 
** '''3''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY-5083]]
+
* [[RUMP-PWY]]
−
** '''5''' reactions found over '''6''' reactions in the full pathway
+
** '''4''' reactions found over '''6''' reactions in the full pathway
−
* [[NAD-BIOSYNTHESIS-II]]
+
* [[P122-PWY]]
−
** '''4''' reactions found over '''3''' reactions in the full pathway
+
** '''16''' reactions found over '''18''' reactions in the full pathway
−
{{#set: transcription-direction=negative}}
+
* [[PWY-6303]]
−
{{#set: right-end-position=88228}}
+
** '''1''' reactions found over '''2''' reactions in the full pathway
−
{{#set: left-end-position=77118}}
+
* [[PWY-6857]]
−
{{#set: centisome-position=30.148596   }}
+
** '''3''' reactions found over '''7''' reactions in the full pathway
 +
{{#set: transcription-direction=positive}}
 +
{{#set: right-end-position=278993}}
 +
{{#set: left-end-position=247082}}
 +
{{#set: centisome-position=53.03122   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=3}}
+
{{#set: nb reaction associated=9}}
−
{{#set: nb pathway associated=4}}
+
{{#set: nb pathway associated=6}}

Latest revision as of 11:09, 18 March 2021

Gene SJ07027

  • transcription-direction:
    • positive
  • right-end-position:
    • 278993
  • left-end-position:
    • 247082
  • centisome-position:
    • 53.03122

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • GLYCOLYSIS-E-D
    • 4 reactions found over 2 reactions in the full pathway
  • OXIDATIVEPENT-PWY
    • 3 reactions found over 3 reactions in the full pathway
  • RUMP-PWY
    • 4 reactions found over 6 reactions in the full pathway
  • P122-PWY
    • 16 reactions found over 18 reactions in the full pathway
  • PWY-6303
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-6857
    • 3 reactions found over 7 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ07027&oldid=135999"