Difference between revisions of "SJ07094"

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(Created page with "Category:gene == Gene SJ03867 == * transcription-direction: ** positive * right-end-position: ** 303524 * left-end-position: ** 294516 * centisome-position: ** 56.716328...")
(Created page with "Category:gene == Gene SJ01144 == * transcription-direction: ** negative * right-end-position: ** 359754 * left-end-position: ** 356378 * centisome-position: ** 64.32688...")
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ03867 ==
+
== Gene SJ01144 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 303524
+
** 359754
 
* left-end-position:
 
* left-end-position:
−
** 294516
+
** 356378
 
* centisome-position:
 
* centisome-position:
−
** 56.716328    
+
** 64.32688    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
−
* [[S.japonica_carotenoid_curated]]
+
* [[S.japonica_sterols_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[GLYOXII-RXN]]
−
* [[2.6.1.64-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[2.6.1.7-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[PHEAMINOTRANS-RXN]]
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[RXN-10721]]
+
* [[RXN-7919]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[RXN-15582]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-6763]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
</div>
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-6309]]
+
* [[PWY-5386]]
−
** '''7''' reactions found over '''11''' reactions in the full pathway
+
** '''2''' reactions found over '''3''' reactions in the full pathway
−
* [[ANAPHENOXI-PWY]]
+
{{#set: transcription-direction=negative}}
−
** '''1''' reactions found over '''3''' reactions in the full pathway
+
{{#set: right-end-position=359754}}
−
* [[PHESYN]]
+
{{#set: left-end-position=356378}}
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
{{#set: centisome-position=64.32688   }}
−
* [[PWY-7432]]
+
{{#set: organism associated=S.japonica_sterols_curated}}
−
** '''3''' reactions found over '''2''' reactions in the full pathway
+
{{#set: nb reaction associated=2}}
−
* [[PWY-5079]]
+
{{#set: nb pathway associated=1}}
−
** '''2''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-6842]]
 
−
** '''5''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-4061]]
 
−
** '''4''' reactions found over '''8''' reactions in the full pathway
 
−
{{#set: transcription-direction=positive}}
 
−
{{#set: right-end-position=303524}}
 
−
{{#set: left-end-position=294516}}
 
−
{{#set: centisome-position=56.716328   }}
 
−
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
−
{{#set: nb reaction associated=6}}
 
−
{{#set: nb pathway associated=7}}
 

Revision as of 20:24, 18 December 2020

Gene SJ01144

  • transcription-direction:
    • negative
  • right-end-position:
    • 359754
  • left-end-position:
    • 356378
  • centisome-position:
    • 64.32688

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-5386
    • 2 reactions found over 3 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ07094&oldid=42793"