Difference between revisions of "SJ07116"

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(Created page with "Category:gene == Gene SJ16441 == * transcription-direction: ** positive * right-end-position: ** 672684 * left-end-position: ** 658629 * centisome-position: ** 95.76033...")
(Created page with "Category:gene == Gene SJ00988 == * transcription-direction: ** negative * right-end-position: ** 49399 * left-end-position: ** 36912 * centisome-position: ** 23.236431...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ16441 ==
+
== Gene SJ00988 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 672684
+
** 49399
 
* left-end-position:
 
* left-end-position:
−
** 658629
+
** 36912
 
* centisome-position:
 
* centisome-position:
−
** 95.76033    
+
** 23.236431    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[RXN1F-20]]
+
* [[2.4.1.151-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-1225]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-18302]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-5531]]
+
* [[PWY-7434]]
−
** '''4''' reactions found over '''9''' reactions in the full pathway
+
** '''5''' reactions found over '''8''' reactions in the full pathway
−
* [[CHLOROPHYLL-SYN]]
+
* [[PWY-401]]
−
** '''6''' reactions found over '''9''' reactions in the full pathway
+
** '''2''' reactions found over '''5''' reactions in the full pathway
−
* [[PWY-7159]]
+
* [[PWY-7666]]
−
** '''5''' reactions found over '''9''' reactions in the full pathway
+
** '''1''' reactions found over '''3''' reactions in the full pathway
−
{{#set: transcription-direction=positive}}
+
* [[PWY-7840]]
−
{{#set: right-end-position=672684}}
+
** '''3''' reactions found over '''5''' reactions in the full pathway
−
{{#set: left-end-position=658629}}
+
{{#set: transcription-direction=negative}}
−
{{#set: centisome-position=95.76033   }}
+
{{#set: right-end-position=49399}}
 +
{{#set: left-end-position=36912}}
 +
{{#set: centisome-position=23.236431   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=1}}
+
{{#set: nb reaction associated=3}}
−
{{#set: nb pathway associated=3}}
+
{{#set: nb pathway associated=4}}

Revision as of 11:09, 15 January 2021

Gene SJ00988

  • transcription-direction:
    • negative
  • right-end-position:
    • 49399
  • left-end-position:
    • 36912
  • centisome-position:
    • 23.236431

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7434
    • 5 reactions found over 8 reactions in the full pathway
  • PWY-401
    • 2 reactions found over 5 reactions in the full pathway
  • PWY-7666
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-7840
    • 3 reactions found over 5 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ07116&oldid=109276"