Difference between revisions of "SJ07117"

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(Created page with "Category:gene == Gene SJ00278 == * transcription-direction: ** positive * right-end-position: ** 46801 * left-end-position: ** 24827 * centisome-position: ** 14.640978...")
(Created page with "Category:gene == Gene SJ07117 == * transcription-direction: ** negative * right-end-position: ** 285234 * left-end-position: ** 236700 * centisome-position: ** 50.977337...")
 
(4 intermediate revisions by 3 users not shown)
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ00278 ==
+
== Gene SJ07117 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 46801
+
** 285234
 
* left-end-position:
 
* left-end-position:
−
** 24827
+
** 236700
 
* centisome-position:
 
* centisome-position:
−
** 14.640978    
+
** 50.977337    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[ATPASE-RXN]]
−
* [[RXN-13398]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-17252]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-7676]]
+
* [[RXN-12195]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
* [[RXN-12196]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-7677]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
* [[RXN0-5462]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-7740]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
</div>
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-6927]]
+
* [[PWY-6545]]
−
** '''2''' reactions found over '''5''' reactions in the full pathway
+
** '''8''' reactions found over '''9''' reactions in the full pathway
−
* [[PWY-5098]]
+
* [[PWY-7210]]
−
** '''2''' reactions found over '''6''' reactions in the full pathway
+
** '''8''' reactions found over '''8''' reactions in the full pathway
−
* [[PWY-5068]]
+
* [[PWY-7198]]
−
** '''4''' reactions found over '''7''' reactions in the full pathway
+
** '''6''' reactions found over '''7''' reactions in the full pathway
−
{{#set: transcription-direction=positive}}
+
* [[PWY-7184]]
−
{{#set: right-end-position=46801}}
+
** '''9''' reactions found over '''9''' reactions in the full pathway
−
{{#set: left-end-position=24827}}
+
{{#set: transcription-direction=negative}}
−
{{#set: centisome-position=14.640978   }}
+
{{#set: right-end-position=285234}}
 +
{{#set: left-end-position=236700}}
 +
{{#set: centisome-position=50.977337   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: nb reaction associated=5}}
 
{{#set: nb reaction associated=5}}
−
{{#set: nb pathway associated=3}}
+
{{#set: nb pathway associated=4}}

Latest revision as of 11:07, 18 March 2021

Gene SJ07117

  • transcription-direction:
    • negative
  • right-end-position:
    • 285234
  • left-end-position:
    • 236700
  • centisome-position:
    • 50.977337

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6545
    • 8 reactions found over 9 reactions in the full pathway
  • PWY-7210
    • 8 reactions found over 8 reactions in the full pathway
  • PWY-7198
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-7184
    • 9 reactions found over 9 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ07117&oldid=134750"