Difference between revisions of "SJ07160"

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(Created page with "Category:gene == Gene SJ00411 == * transcription-direction: ** positive * right-end-position: ** 565924 * left-end-position: ** 560840 * centisome-position: ** 98.76343...")
(Created page with "Category:gene == Gene SJ03332 == * transcription-direction: ** positive * right-end-position: ** 108545 * left-end-position: ** 102701 * centisome-position: ** 83.962296...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
== Gene SJ00411 ==
+
== Gene SJ03332 ==
 
* transcription-direction:
 
* transcription-direction:
 
** positive
 
** positive
 
* right-end-position:
 
* right-end-position:
** 565924
+
** 108545
 
* left-end-position:
 
* left-end-position:
** 560840
+
** 102701
 
* centisome-position:
 
* centisome-position:
** 98.76343    
+
** 83.962296    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
* [[RIB5PISOM-RXN]]
+
* [[RXN-15559]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-15560]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[UBIQUITIN--PROTEIN-LIGASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
* [[P124-PWY]]
+
* [[PWY-7511]]
** '''12''' reactions found over '''15''' reactions in the full pathway
 
* [[P185-PWY]]
 
** '''11''' reactions found over '''12''' reactions in the full pathway
 
* [[NONOXIPENT-PWY]]
 
** '''5''' reactions found over '''5''' reactions in the full pathway
 
* [[PWY-5723]]
 
** '''10''' reactions found over '''10''' reactions in the full pathway
 
* [[CALVIN-PWY]]
 
** '''12''' reactions found over '''13''' reactions in the full pathway
 
* [[PWY-1861]]
 
 
** '''7''' reactions found over '''9''' reactions in the full pathway
 
** '''7''' reactions found over '''9''' reactions in the full pathway
 
{{#set: transcription-direction=positive}}
 
{{#set: transcription-direction=positive}}
{{#set: right-end-position=565924}}
+
{{#set: right-end-position=108545}}
{{#set: left-end-position=560840}}
+
{{#set: left-end-position=102701}}
{{#set: centisome-position=98.76343   }}
+
{{#set: centisome-position=83.962296   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
{{#set: nb reaction associated=1}}
+
{{#set: nb reaction associated=3}}
{{#set: nb pathway associated=6}}
+
{{#set: nb pathway associated=1}}

Revision as of 18:45, 14 January 2021

Gene SJ03332

  • transcription-direction:
    • positive
  • right-end-position:
    • 108545
  • left-end-position:
    • 102701
  • centisome-position:
    • 83.962296

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7511
    • 7 reactions found over 9 reactions in the full pathway