Difference between revisions of "SJ07193"
Jump to navigation
Jump to search
(Created page with "Category:gene == Gene SJ18806 == * transcription-direction: ** negative * right-end-position: ** 94407 * left-end-position: ** 87277 * centisome-position: ** 37.03985...") |
(Created page with "Category:gene == Gene SJ21798 == * transcription-direction: ** negative * right-end-position: ** 41506 * left-end-position: ** 24465 * centisome-position: ** 4.1395726...") |
||
| Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
| − | == Gene | + | == Gene SJ21798 == |
* transcription-direction: | * transcription-direction: | ||
** negative | ** negative | ||
* right-end-position: | * right-end-position: | ||
| − | ** | + | ** 41506 |
* left-end-position: | * left-end-position: | ||
| − | ** | + | ** 24465 |
* centisome-position: | * centisome-position: | ||
| − | ** | + | ** 4.1395726 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
| − | * [[ | + | * [[PPPGO]] |
| + | ** Category: [[orthology]] | ||
| + | *** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | ||
| + | * [[PROTOPORGENOXI-RXN]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| Line 18: | Line 21: | ||
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a | *** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a | ||
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
| + | * [[RXN-17517]] | ||
| + | ** Category: [[annotation]] | ||
| + | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
== Pathway(s) associated == | == Pathway(s) associated == | ||
| − | * [[PWY- | + | * [[HEME-BIOSYNTHESIS-II]] |
| − | ** ''' | + | ** '''4''' reactions found over '''4''' reactions in the full pathway |
| + | * [[PWY-7159]] | ||
| + | ** '''5''' reactions found over '''9''' reactions in the full pathway | ||
| + | * [[PWY0-1415]] | ||
| + | ** '''5''' reactions found over '''n.a''' reactions in the full pathway | ||
| + | * [[CHLOROPHYLL-SYN]] | ||
| + | ** '''6''' reactions found over '''9''' reactions in the full pathway | ||
| + | * [[PWY-7766]] | ||
| + | ** '''3''' reactions found over '''5''' reactions in the full pathway | ||
{{#set: transcription-direction=negative}} | {{#set: transcription-direction=negative}} | ||
| − | {{#set: right-end-position= | + | {{#set: right-end-position=41506}} |
| − | {{#set: left-end-position= | + | {{#set: left-end-position=24465}} |
| − | {{#set: centisome-position= | + | {{#set: centisome-position=4.1395726 }} |
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
| − | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=3}} |
| − | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=5}} |
Revision as of 08:20, 15 March 2021
Contents
Gene SJ21798
- transcription-direction:
- negative
- right-end-position:
- 41506
- left-end-position:
- 24465
- centisome-position:
- 4.1395726
Organism(s) associated with this gene
Reaction(s) associated
- PPPGO
- Category: orthology
- source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- Category: orthology
- PROTOPORGENOXI-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
- RXN-17517
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
Pathway(s) associated
- HEME-BIOSYNTHESIS-II
- 4 reactions found over 4 reactions in the full pathway
- PWY-7159
- 5 reactions found over 9 reactions in the full pathway
- PWY0-1415
- 5 reactions found over n.a reactions in the full pathway
- CHLOROPHYLL-SYN
- 6 reactions found over 9 reactions in the full pathway
- PWY-7766
- 3 reactions found over 5 reactions in the full pathway
