Difference between revisions of "SJ07193"

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(Created page with "Category:gene == Gene SJ11643 == * transcription-direction: ** positive * right-end-position: ** 546357 * left-end-position: ** 539250 * centisome-position: ** 69.190056...")
(Created page with "Category:gene == Gene SJ16484 == * transcription-direction: ** negative * right-end-position: ** 13551 * left-end-position: ** 4030 * centisome-position: ** 1.4301887...")
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[[Category:gene]]
 
[[Category:gene]]
== Gene SJ11643 ==
+
== Gene SJ16484 ==
 
* transcription-direction:
 
* transcription-direction:
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
** 546357
+
** 13551
 
* left-end-position:
 
* left-end-position:
** 539250
+
** 4030
 
* centisome-position:
 
* centisome-position:
** 69.190056    
+
** 1.4301887    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
* [[1.1.1.39-RXN]]
+
* [[GLYCINE--TRNA-LIGASE-RXN]]
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* [[MALIC-NADP-RXN]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* [[OXALODECARB-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
Line 28: Line 18:
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[TRNA-CHARGING-PWY]]
* [[PWY-7118]]
+
** '''21''' reactions found over '''21''' reactions in the full pathway
** '''5''' reactions found over '''6''' reactions in the full pathway
+
{{#set: transcription-direction=negative}}
* [[GLUCONEO-PWY]]
+
{{#set: right-end-position=13551}}
** '''12''' reactions found over '''13''' reactions in the full pathway
+
{{#set: left-end-position=4030}}
* [[PWY-7115]]
+
{{#set: centisome-position=1.4301887   }}
** '''9''' reactions found over '''10''' reactions in the full pathway
 
* [[PWY-7686]]
 
** '''1''' reactions found over '''1''' reactions in the full pathway
 
* [[PWY-3641]]
 
** '''2''' reactions found over '''3''' reactions in the full pathway
 
* [[PWY-7384]]
 
** '''6''' reactions found over '''10''' reactions in the full pathway
 
* [[PWY-7117]]
 
** '''10''' reactions found over '''12''' reactions in the full pathway
 
* [[PWY-241]]
 
** '''5''' reactions found over '''6''' reactions in the full pathway
 
* [[P184-PWY]]
 
** '''2''' reactions found over '''8''' reactions in the full pathway
 
* [[PWY-6339]]
 
** '''2''' reactions found over '''9''' reactions in the full pathway
 
* [[METHYLGALLATE-DEGRADATION-PWY]]
 
** '''2''' reactions found over '''6''' reactions in the full pathway
 
</div>
 
{{#set: transcription-direction=positive}}
 
{{#set: right-end-position=546357}}
 
{{#set: left-end-position=539250}}
 
{{#set: centisome-position=69.190056   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
{{#set: nb reaction associated=3}}
+
{{#set: nb reaction associated=1}}
{{#set: nb pathway associated=11}}
+
{{#set: nb pathway associated=1}}

Revision as of 09:26, 27 August 2019

Gene SJ16484

  • transcription-direction:
    • negative
  • right-end-position:
    • 13551
  • left-end-position:
    • 4030
  • centisome-position:
    • 1.4301887

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated