Difference between revisions of "SJ07193"

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(Created page with "Category:gene == Gene SJ16484 == * transcription-direction: ** negative * right-end-position: ** 13551 * left-end-position: ** 4030 * centisome-position: ** 1.4301887...")
(Created page with "Category:gene == Gene SJ01171 == * transcription-direction: ** positive * right-end-position: ** 121578 * left-end-position: ** 97403 * centisome-position: ** 62.969025...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ16484 ==
+
== Gene SJ01171 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 13551
+
** 121578
 
* left-end-position:
 
* left-end-position:
−
** 4030
+
** 97403
 
* centisome-position:
 
* centisome-position:
−
** 1.4301887    
+
** 62.969025    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
−
* [[S.japonica_carotenoid_curated]]
+
* [[S.japonica_sterols_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[GLYCINE--TRNA-LIGASE-RXN]]
+
* [[4-NITROPHENYLPHOSPHATASE-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[ACID-PHOSPHATASE-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-5822]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[TRNA-CHARGING-PWY]]
+
* [[PWY-6348]]
−
** '''21''' reactions found over '''21''' reactions in the full pathway
+
** '''1''' reactions found over '''1''' reactions in the full pathway
−
{{#set: transcription-direction=negative}}
+
* [[NAD-BIOSYNTHESIS-II]]
−
{{#set: right-end-position=13551}}
+
** '''4''' reactions found over '''3''' reactions in the full pathway
−
{{#set: left-end-position=4030}}
+
* [[NADPHOS-DEPHOS-PWY]]
−
{{#set: centisome-position=1.4301887   }}
+
** '''3''' reactions found over '''3''' reactions in the full pathway
−
{{#set: organism associated=S.japonica_carotenoid_curated}}
+
* [[PWY-5083]]
−
{{#set: nb reaction associated=1}}
+
** '''5''' reactions found over '''6''' reactions in the full pathway
−
{{#set: nb pathway associated=1}}
+
{{#set: transcription-direction=positive}}
 +
{{#set: right-end-position=121578}}
 +
{{#set: left-end-position=97403}}
 +
{{#set: centisome-position=62.969025   }}
 +
{{#set: organism associated=S.japonica_sterols_curated}}
 +
{{#set: nb reaction associated=3}}
 +
{{#set: nb pathway associated=4}}

Revision as of 20:26, 18 December 2020

Gene SJ01171

  • transcription-direction:
    • positive
  • right-end-position:
    • 121578
  • left-end-position:
    • 97403
  • centisome-position:
    • 62.969025

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6348
    • 1 reactions found over 1 reactions in the full pathway
  • NAD-BIOSYNTHESIS-II
    • 4 reactions found over 3 reactions in the full pathway
  • NADPHOS-DEPHOS-PWY
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-5083
    • 5 reactions found over 6 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ07193&oldid=43889"