Difference between revisions of "SJ07221"

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(Created page with "Category:gene == Gene SJ10661 == * transcription-direction: ** positive * right-end-position: ** 110818 * left-end-position: ** 96057 * centisome-position: ** 12.188396...")
(Created page with "Category:gene == Gene SJ07221 == * transcription-direction: ** negative * right-end-position: ** 1020521 * left-end-position: ** 998167 * centisome-position: ** 68.31725...")
 
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ10661 ==
+
== Gene SJ07221 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 110818
+
** 1020521
 
* left-end-position:
 
* left-end-position:
−
** 96057
+
** 998167
 
* centisome-position:
 
* centisome-position:
−
** 12.188396    
+
** 68.31725    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
−
* [[S.japonica_sterols_curated]]
+
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[HISTIDINE--TRNA-LIGASE-RXN]]
−
* [[1.8.1.4-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[PYRNUTRANSHYDROGEN-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[HISTIDINE-AMMONIA-LYASE-RXN]]
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[RXN-7716]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-7719]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-8629]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN0-1132]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
</div>
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-5083]]
+
* [[TRNA-CHARGING-PWY]]
−
** '''5''' reactions found over '''6''' reactions in the full pathway
+
** '''21''' reactions found over '''21''' reactions in the full pathway
−
* [[PWY-5084]]
+
* [[HISDEG-PWY]]
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
** '''1''' reactions found over '''4''' reactions in the full pathway
−
* [[PWY-5046]]
+
* [[PWY-5028]]
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
** '''1''' reactions found over '''5''' reactions in the full pathway
−
* [[GLYCLEAV-PWY]]
+
* [[PWY-5030]]
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
** '''3''' reactions found over '''6''' reactions in the full pathway
−
* [[PYRUVDEHYD-PWY]]
+
* [[HISHP-PWY]]
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
** '''1''' reactions found over '''8''' reactions in the full pathway
−
{{#set: transcription-direction=positive}}
+
{{#set: transcription-direction=negative}}
−
{{#set: right-end-position=110818}}
+
{{#set: right-end-position=1020521}}
−
{{#set: left-end-position=96057}}
+
{{#set: left-end-position=998167}}
−
{{#set: centisome-position=12.188396   }}
+
{{#set: centisome-position=68.31725   }}
−
{{#set: organism associated=S.japonica_sterols_curated}}
+
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=6}}
+
{{#set: nb reaction associated=2}}
 
{{#set: nb pathway associated=5}}
 
{{#set: nb pathway associated=5}}

Latest revision as of 11:04, 18 March 2021

Gene SJ07221

  • transcription-direction:
    • negative
  • right-end-position:
    • 1020521
  • left-end-position:
    • 998167
  • centisome-position:
    • 68.31725

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • TRNA-CHARGING-PWY
    • 21 reactions found over 21 reactions in the full pathway
  • HISDEG-PWY
    • 1 reactions found over 4 reactions in the full pathway
  • PWY-5028
    • 1 reactions found over 5 reactions in the full pathway
  • PWY-5030
    • 3 reactions found over 6 reactions in the full pathway
  • HISHP-PWY
    • 1 reactions found over 8 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ07221&oldid=133269"