Difference between revisions of "SJ07221"

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(Created page with "Category:gene == Gene SJ08421 == * transcription-direction: ** positive * right-end-position: ** 295428 * left-end-position: ** 289052 * centisome-position: ** 65.502785...")
(Created page with "Category:gene == Gene SJ07221 == * transcription-direction: ** negative * right-end-position: ** 1020521 * left-end-position: ** 998167 * centisome-position: ** 68.31725...")
 
(2 intermediate revisions by one other user not shown)
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ08421 ==
+
== Gene SJ07221 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 295428
+
** 1020521
 
* left-end-position:
 
* left-end-position:
−
** 289052
+
** 998167
 
* centisome-position:
 
* centisome-position:
−
** 65.502785    
+
** 68.31725    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[PEROXID-RXN]]
+
* [[HISTIDINE--TRNA-LIGASE-RXN]]
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-14240]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-15288]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-17352]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-8635]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[HISTIDINE-AMMONIA-LYASE-RXN]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-7214]]
+
* [[TRNA-CHARGING-PWY]]
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
** '''21''' reactions found over '''21''' reactions in the full pathway
−
* [[PWY-7445]]
+
* [[HISDEG-PWY]]
 
** '''1''' reactions found over '''4''' reactions in the full pathway
 
** '''1''' reactions found over '''4''' reactions in the full pathway
−
* [[PWY-5466]]
+
* [[PWY-5028]]
−
** '''2''' reactions found over '''10''' reactions in the full pathway
+
** '''1''' reactions found over '''5''' reactions in the full pathway
−
* [[PWY-6824]]
+
* [[PWY-5030]]
−
** '''2''' reactions found over '''10''' reactions in the full pathway
+
** '''3''' reactions found over '''6''' reactions in the full pathway
−
* [[PWY-5469]]
+
* [[HISHP-PWY]]
−
** '''2''' reactions found over '''8''' reactions in the full pathway
+
** '''1''' reactions found over '''8''' reactions in the full pathway
−
* [[PWY-5461]]
+
{{#set: transcription-direction=negative}}
−
** '''1''' reactions found over '''1''' reactions in the full pathway
+
{{#set: right-end-position=1020521}}
−
{{#set: transcription-direction=positive}}
+
{{#set: left-end-position=998167}}
−
{{#set: right-end-position=295428}}
+
{{#set: centisome-position=68.31725   }}
−
{{#set: left-end-position=289052}}
 
−
{{#set: centisome-position=65.502785   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=5}}
+
{{#set: nb reaction associated=2}}
−
{{#set: nb pathway associated=6}}
+
{{#set: nb pathway associated=5}}

Latest revision as of 11:04, 18 March 2021

Gene SJ07221

  • transcription-direction:
    • negative
  • right-end-position:
    • 1020521
  • left-end-position:
    • 998167
  • centisome-position:
    • 68.31725

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • TRNA-CHARGING-PWY
    • 21 reactions found over 21 reactions in the full pathway
  • HISDEG-PWY
    • 1 reactions found over 4 reactions in the full pathway
  • PWY-5028
    • 1 reactions found over 5 reactions in the full pathway
  • PWY-5030
    • 3 reactions found over 6 reactions in the full pathway
  • HISHP-PWY
    • 1 reactions found over 8 reactions in the full pathway




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