Difference between revisions of "SJ07226"

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(Created page with "Category:gene == Gene SJ17018 == * transcription-direction: ** positive * right-end-position: ** 191301 * left-end-position: ** 170895 * centisome-position: ** 62.52538...")
(Created page with "Category:gene == Gene SJ02442 == * transcription-direction: ** negative * right-end-position: ** 134560 * left-end-position: ** 131842 * centisome-position: ** 97.21714...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ17018 ==
+
== Gene SJ02442 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 191301
+
** 134560
 
* left-end-position:
 
* left-end-position:
−
** 170895
+
** 131842
 
* centisome-position:
 
* centisome-position:
−
** 62.52538    
+
** 97.21714    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
−
* [[S.japonica_sterols_curated]]
+
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
* [[DIHYDROFOLATESYNTH-RXN]]
+
* [[GSHTRAN-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[FOLYLPOLYGLUTAMATESYNTH-RXN]]
+
* [[GST-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[FORMYLTHFGLUSYNTH-RXN]]
+
* [[PROSTAGLANDIN-D-SYNTHASE-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-13673]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[RXN-6341]]
+
* [[RXN-15680]]
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN0-2921]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
Line 39: Line 38:
 
</div>
 
</div>
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-6614]]
+
* [[PWY-6842]]
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
** '''5''' reactions found over '''9''' reactions in the full pathway
−
* [[PWY-2161]]
+
* [[PWY-4061]]
−
** '''5''' reactions found over '''5''' reactions in the full pathway
+
** '''4''' reactions found over '''8''' reactions in the full pathway
−
{{#set: transcription-direction=positive}}
+
* [[PWY66-374]]
−
{{#set: right-end-position=191301}}
+
** '''2''' reactions found over '''5''' reactions in the full pathway
−
{{#set: left-end-position=170895}}
+
* [[PWY-7112]]
−
{{#set: centisome-position=62.52538   }}
+
** '''3''' reactions found over '''4''' reactions in the full pathway
−
{{#set: organism associated=S.japonica_sterols_curated}}
+
* [[PWY-7533]]
 +
** '''3''' reactions found over '''9''' reactions in the full pathway
 +
{{#set: transcription-direction=negative}}
 +
{{#set: right-end-position=134560}}
 +
{{#set: left-end-position=131842}}
 +
{{#set: centisome-position=97.21714   }}
 +
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: nb reaction associated=5}}
 
{{#set: nb reaction associated=5}}
−
{{#set: nb pathway associated=2}}
+
{{#set: nb pathway associated=5}}

Revision as of 14:52, 5 January 2021

Gene SJ02442

  • transcription-direction:
    • negative
  • right-end-position:
    • 134560
  • left-end-position:
    • 131842
  • centisome-position:
    • 97.21714

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6842
    • 5 reactions found over 9 reactions in the full pathway
  • PWY-4061
    • 4 reactions found over 8 reactions in the full pathway
  • PWY66-374
    • 2 reactions found over 5 reactions in the full pathway
  • PWY-7112
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-7533
    • 3 reactions found over 9 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ07226&oldid=57953"