Difference between revisions of "SJ07240"

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(Created page with "Category:gene == Gene SJ21121 == * transcription-direction: ** positive * right-end-position: ** 534078 * left-end-position: ** 525703 * centisome-position: ** 86.97917...")
(Created page with "Category:gene == Gene SJ07240 == * transcription-direction: ** negative * right-end-position: ** 1226002 * left-end-position: ** 1202005 * centisome-position: ** 82.26848...")
 
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ21121 ==
+
== Gene SJ07240 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 534078
+
** 1226002
 
* left-end-position:
 
* left-end-position:
−
** 525703
+
** 1202005
 
* centisome-position:
 
* centisome-position:
−
** 86.97917    
+
** 82.26848    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[ATPASE-RXN]]
−
* [[ADPREDUCT-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[CDPREDUCT-RXN]]
+
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[GDPREDUCT-RXN]]
+
* [[RXN-12195]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RIBONUCLEOSIDE-DIP-REDUCTI-RXN]]
+
* [[RXN-12196]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RIBONUCLEOSIDE-DIP-REDUCTII-RXN]]
+
* [[RXN0-5462]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN0-722]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN0-747]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN0-748]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[UDPREDUCT-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
</div>
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-7220]]
+
* [[PWY-6545]]
−
** '''4''' reactions found over '''4''' reactions in the full pathway
+
** '''8''' reactions found over '''9''' reactions in the full pathway
−
* [[PWY-7227]]
 
−
** '''2''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY0-166]]
 
−
** '''14''' reactions found over '''13''' reactions in the full pathway
 
 
* [[PWY-7210]]
 
* [[PWY-7210]]
 
** '''8''' reactions found over '''8''' reactions in the full pathway
 
** '''8''' reactions found over '''8''' reactions in the full pathway
Line 54: Line 38:
 
* [[PWY-7184]]
 
* [[PWY-7184]]
 
** '''9''' reactions found over '''9''' reactions in the full pathway
 
** '''9''' reactions found over '''9''' reactions in the full pathway
−
* [[PWY-6545]]
+
{{#set: transcription-direction=negative}}
−
** '''8''' reactions found over '''9''' reactions in the full pathway
+
{{#set: right-end-position=1226002}}
−
* [[PWY-7222]]
+
{{#set: left-end-position=1202005}}
−
** '''4''' reactions found over '''4''' reactions in the full pathway
+
{{#set: centisome-position=82.26848   }}
−
* [[PWY-7226]]
 
−
** '''2''' reactions found over '''2''' reactions in the full pathway
 
−
{{#set: transcription-direction=positive}}
 
−
{{#set: right-end-position=534078}}
 
−
{{#set: left-end-position=525703}}
 
−
{{#set: centisome-position=86.97917   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=9}}
+
{{#set: nb reaction associated=5}}
−
{{#set: nb pathway associated=9}}
+
{{#set: nb pathway associated=4}}

Latest revision as of 11:09, 18 March 2021

Gene SJ07240

  • transcription-direction:
    • negative
  • right-end-position:
    • 1226002
  • left-end-position:
    • 1202005
  • centisome-position:
    • 82.26848

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6545
    • 8 reactions found over 9 reactions in the full pathway
  • PWY-7210
    • 8 reactions found over 8 reactions in the full pathway
  • PWY-7198
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-7184
    • 9 reactions found over 9 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ07240&oldid=135655"