Difference between revisions of "SJ07240"
Jump to navigation
Jump to search
(Created page with "Category:gene == Gene SJ08215 == * transcription-direction: ** positive * right-end-position: ** 240185 * left-end-position: ** 230263 * centisome-position: ** 51.839905...") |
(Created page with "Category:gene == Gene SJ12893 == * transcription-direction: ** negative * right-end-position: ** 148103 * left-end-position: ** 139625 * centisome-position: ** 39.896732...") |
||
| Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
| − | == Gene | + | == Gene SJ12893 == |
* transcription-direction: | * transcription-direction: | ||
| − | ** | + | ** negative |
* right-end-position: | * right-end-position: | ||
| − | ** | + | ** 148103 |
* left-end-position: | * left-end-position: | ||
| − | ** | + | ** 139625 |
* centisome-position: | * centisome-position: | ||
| − | ** | + | ** 39.896732 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
| − | * [[ | + | * [[DUTNH]] |
| − | ** Category: [[ | + | ** Category: [[orthology]] |
| − | *** source: [[ | + | *** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a |
| − | * [[ | + | * [[DUTP-PYROP-RXN]] |
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
== Pathway(s) associated == | == Pathway(s) associated == | ||
| − | * [[PWY- | + | * [[PWY-7187]] |
| − | ** ''' | + | ** '''6''' reactions found over '''7''' reactions in the full pathway |
| − | * [[ | + | * [[PWY0-166]] |
| − | ** ''' | + | ** '''14''' reactions found over '''13''' reactions in the full pathway |
| − | * [[PWY- | + | * [[PWY-7206]] |
| − | ** '''2''' reactions found over ''' | + | ** '''2''' reactions found over '''3''' reactions in the full pathway |
| − | * [[PWY- | + | * [[PWY-7184]] |
| − | ** ''' | + | ** '''9''' reactions found over '''9''' reactions in the full pathway |
| − | * [[PWY- | + | * [[PWY-6545]] |
| − | ** | + | ** '''8''' reactions found over '''9''' reactions in the full pathway |
| − | + | {{#set: transcription-direction=negative}} | |
| − | + | {{#set: right-end-position=148103}} | |
| − | {{#set: transcription-direction= | + | {{#set: left-end-position=139625}} |
| − | {{#set: right-end-position= | + | {{#set: centisome-position=39.896732 }} |
| − | {{#set: left-end-position= | ||
| − | {{#set: centisome-position= | ||
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
| − | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=2}} |
| − | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=5}} |
Revision as of 13:05, 14 January 2021
Contents
Gene SJ12893
- transcription-direction:
- negative
- right-end-position:
- 148103
- left-end-position:
- 139625
- centisome-position:
- 39.896732
Organism(s) associated with this gene
Reaction(s) associated
- DUTNH
- Category: orthology
- source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- Category: orthology
- DUTP-PYROP-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
Pathway(s) associated
- PWY-7187
- 6 reactions found over 7 reactions in the full pathway
- PWY0-166
- 14 reactions found over 13 reactions in the full pathway
- PWY-7206
- 2 reactions found over 3 reactions in the full pathway
- PWY-7184
- 9 reactions found over 9 reactions in the full pathway
- PWY-6545
- 8 reactions found over 9 reactions in the full pathway
