Difference between revisions of "SJ07285"

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(Created page with "Category:gene == Gene SJ18666 == * transcription-direction: ** positive * right-end-position: ** 228579 * left-end-position: ** 225561 * centisome-position: ** 94.00921...")
(Created page with "Category:gene == Gene SJ15145 == * transcription-direction: ** negative * right-end-position: ** 54558 * left-end-position: ** 45549 * centisome-position: ** 15.132507...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ18666 ==
+
== Gene SJ15145 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 228579
+
** 54558
 
* left-end-position:
 
* left-end-position:
−
** 225561
+
** 45549
 
* centisome-position:
 
* centisome-position:
−
** 94.00921    
+
** 15.132507    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
−
* [[S.japonica_carotenoid_curated]]
+
* [[S.japonica_sterols_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[PMPOXI-RXN]]
+
* [[ATPASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* [[PNPOXI-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
* [[RXN-12195]]
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* [[PYRIDOXINE-4-OXIDASE-RXN]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-12752]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-13142]]
+
* [[RXN-12196]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN0-5462]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PLPSAL-PWY]]
+
* [[PWY-6545]]
−
** '''5''' reactions found over '''5''' reactions in the full pathway
+
** '''8''' reactions found over '''9''' reactions in the full pathway
−
* [[PWY-7204]]
+
* [[PWY-7210]]
 +
** '''8''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-7198]]
 +
** '''6''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-7184]]
 
** '''9''' reactions found over '''9''' reactions in the full pathway
 
** '''9''' reactions found over '''9''' reactions in the full pathway
−
* [[PYRIDOXSYN-PWY]]
+
{{#set: transcription-direction=negative}}
−
** '''3''' reactions found over '''7''' reactions in the full pathway
+
{{#set: right-end-position=54558}}
−
* [[PWY-7282]]
+
{{#set: left-end-position=45549}}
−
** '''6''' reactions found over '''9''' reactions in the full pathway
+
{{#set: centisome-position=15.132507   }}
−
* [[PWY-5499]]
+
{{#set: organism associated=S.japonica_sterols_curated}}
−
** '''1''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-6938]]
 
−
** '''2''' reactions found over '''4''' reactions in the full pathway
 
−
{{#set: transcription-direction=positive}}
 
−
{{#set: right-end-position=228579}}
 
−
{{#set: left-end-position=225561}}
 
−
{{#set: centisome-position=94.00921   }}
 
−
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
 
{{#set: nb reaction associated=5}}
 
{{#set: nb reaction associated=5}}
−
{{#set: nb pathway associated=6}}
+
{{#set: nb pathway associated=4}}

Revision as of 20:28, 18 December 2020

Gene SJ15145

  • transcription-direction:
    • negative
  • right-end-position:
    • 54558
  • left-end-position:
    • 45549
  • centisome-position:
    • 15.132507

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6545
    • 8 reactions found over 9 reactions in the full pathway
  • PWY-7210
    • 8 reactions found over 8 reactions in the full pathway
  • PWY-7198
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-7184
    • 9 reactions found over 9 reactions in the full pathway




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