Difference between revisions of "SJ07300"

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(Created page with "Category:gene == Gene SJ16261 == * transcription-direction: ** negative * right-end-position: ** 138644 * left-end-position: ** 125989 * centisome-position: ** 18.268806...")
(Created page with "Category:gene == Gene SJ12991 == * transcription-direction: ** negative * right-end-position: ** 568486 * left-end-position: ** 559079 * centisome-position: ** 75.4738...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ16261 ==
+
== Gene SJ12991 ==
 
* transcription-direction:
 
* transcription-direction:
 
** negative
 
** negative
 
* right-end-position:
 
* right-end-position:
−
** 138644
+
** 568486
 
* left-end-position:
 
* left-end-position:
−
** 125989
+
** 559079
 
* centisome-position:
 
* centisome-position:
−
** 18.268806    
+
** 75.4738    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
−
* [[S.japonica_carotenoid_curated]]
+
* [[S.japonica_sterols_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[FORMATETHFLIG-RXN]]
−
* [[DIACYLGLYKIN-RXN]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[NAD-KIN-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-11376]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN3DJ-11417]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[RXN3O-458]]
+
* [[METHENYLTHFCYCLOHYDRO-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[SPHINGANINE-KINASE-RXN]]
+
* [[METHYLENETHFDEHYDROG-NADP-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
</div>
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
* [[PWY-7039]]
+
* [[PWY-2161]]
−
** '''4''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-7817]]
 
−
** '''6''' reactions found over '''16''' reactions in the full pathway
 
−
* [[NADPHOS-DEPHOS-PWY-1]]
 
−
** '''2''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY-7269]]
 
 
** '''5''' reactions found over '''5''' reactions in the full pathway
 
** '''5''' reactions found over '''5''' reactions in the full pathway
−
* [[PWY-7268]]
+
* [[PWY-2201]]
−
** '''4''' reactions found over '''5''' reactions in the full pathway
+
** '''9''' reactions found over '''10''' reactions in the full pathway
−
* [[NADPHOS-DEPHOS-PWY]]
+
* [[PWY-1722]]
 
** '''3''' reactions found over '''3''' reactions in the full pathway
 
** '''3''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY-5083]]
+
* [[CODH-PWY]]
−
** '''5''' reactions found over '''6''' reactions in the full pathway
+
** '''4''' reactions found over '''9''' reactions in the full pathway
−
* [[PWY-6483]]
+
* [[PWY-3841]]
−
** '''1''' reactions found over '''3''' reactions in the full pathway
+
** '''9''' reactions found over '''11''' reactions in the full pathway
−
* [[PWY3DJ-11470]]
+
* [[1CMET2-PWY]]
−
** '''3''' reactions found over '''8''' reactions in the full pathway
+
** '''8''' reactions found over '''9''' reactions in the full pathway
−
* [[PWY-7119]]
+
* [[PWY-5497]]
−
** '''4''' reactions found over '''11''' reactions in the full pathway
+
** '''10''' reactions found over '''24''' reactions in the full pathway
−
* [[PWY-5129]]
+
* [[P164-PWY]]
−
** '''4''' reactions found over '''13''' reactions in the full pathway
+
** '''6''' reactions found over '''17''' reactions in the full pathway
 +
* [[PWY-5030]]
 +
** '''3''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-7909]]
 +
** '''3''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-6613]]
 +
** '''2''' reactions found over '''2''' reactions in the full pathway
 
</div>
 
</div>
 
{{#set: transcription-direction=negative}}
 
{{#set: transcription-direction=negative}}
−
{{#set: right-end-position=138644}}
+
{{#set: right-end-position=568486}}
−
{{#set: left-end-position=125989}}
+
{{#set: left-end-position=559079}}
−
{{#set: centisome-position=18.268806   }}
+
{{#set: centisome-position=75.4738   }}
−
{{#set: organism associated=S.japonica_carotenoid_curated}}
+
{{#set: organism associated=S.japonica_sterols_curated}}
−
{{#set: nb reaction associated=6}}
+
{{#set: nb reaction associated=3}}
 
{{#set: nb pathway associated=11}}
 
{{#set: nb pathway associated=11}}

Revision as of 20:28, 18 December 2020

Gene SJ12991

  • transcription-direction:
    • negative
  • right-end-position:
    • 568486
  • left-end-position:
    • 559079
  • centisome-position:
    • 75.4738

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-2161
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-2201
    • 9 reactions found over 10 reactions in the full pathway
  • PWY-1722
    • 3 reactions found over 3 reactions in the full pathway
  • CODH-PWY
    • 4 reactions found over 9 reactions in the full pathway
  • PWY-3841
    • 9 reactions found over 11 reactions in the full pathway
  • 1CMET2-PWY
    • 8 reactions found over 9 reactions in the full pathway
  • PWY-5497
    • 10 reactions found over 24 reactions in the full pathway
  • P164-PWY
    • 6 reactions found over 17 reactions in the full pathway
  • PWY-5030
    • 3 reactions found over 6 reactions in the full pathway
  • PWY-7909
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-6613
    • 2 reactions found over 2 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ07300&oldid=44869"