Difference between revisions of "SJ07303"

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(Created page with "Category:gene == Gene SJ07227 == == Organism(s) associated with this gene == * S.japonica_carotenoid_curated == Reaction(s) associated == * RXN-8025 ** Category:...")
(Created page with "Category:gene == Gene SJ07303 == * transcription-direction: ** negative * right-end-position: ** 300522 * left-end-position: ** 268343 * centisome-position: ** 57.82831...")
 
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ07227 ==
+
== Gene SJ07303 ==
 +
* transcription-direction:
 +
** negative
 +
* right-end-position:
 +
** 300522
 +
* left-end-position:
 +
** 268343
 +
* centisome-position:
 +
** 57.82831   
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[RXN-8025]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
** Category: [[manual]]
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* [[4-NITROPHENYLPHOSPHATASE-RXN]]
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*** source: [[sjap]]; tool: [[unknown-tool]]; comment: transformation of diatoxanthin into diadinoxanthin (second cycle of xanthophylls)
+
** Category: [[annotation]]
−
* [[RXN-8026]]
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[manual]]
+
* [[RXN1G-1435]]
−
*** source: [[sjap]]; tool: [[unknown-tool]]; comment: transformation of diatoxanthin into diadinoxanthin (second cycle of xanthophylls)
+
** Category: [[annotation]]
−
* [[RXN1F-152]]
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[manual]]
 
−
*** source: [[sjap]]; tool: [[unknown-tool]]; comment: transformation of diatoxanthin into diadinoxanthin (second cycle of xanthophylls)
 
−
* [[UNSPECIFIC-MONOOXYGENASE-RXN]]
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN1G-1436]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN1G-1437]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN1G-1438]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN1G-1439]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[TREHALOSE6PSYN-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[TREHALOSEPHOSPHA-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
</div>
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-7638]]
+
* [[PWYG-321]]
−
** '''2''' reactions found over '''4''' reactions in the full pathway
+
** '''26''' reactions found over '''205''' reactions in the full pathway
−
* [[PWY-5944]]
+
* [[TRESYN-PWY]]
 
** '''2''' reactions found over '''2''' reactions in the full pathway
 
** '''2''' reactions found over '''2''' reactions in the full pathway
−
* [[PWY-5288]]
+
* [[PWY-7900]]
−
** '''2''' reactions found over '''10''' reactions in the full pathway
+
** '''2''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-881]]
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 +
* [[TREHALOSESYN-PWY]]
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 +
{{#set: transcription-direction=negative}}
 +
{{#set: right-end-position=300522}}
 +
{{#set: left-end-position=268343}}
 +
{{#set: centisome-position=57.82831    }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=4}}
+
{{#set: nb reaction associated=8}}
−
{{#set: nb pathway associated=3}}
+
{{#set: nb pathway associated=5}}

Latest revision as of 11:03, 18 March 2021

Gene SJ07303

  • transcription-direction:
    • negative
  • right-end-position:
    • 300522
  • left-end-position:
    • 268343
  • centisome-position:
    • 57.82831

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWYG-321
    • 26 reactions found over 205 reactions in the full pathway
  • TRESYN-PWY
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-7900
    • 2 reactions found over 8 reactions in the full pathway
  • PWY-881
    • 1 reactions found over 2 reactions in the full pathway
  • TREHALOSESYN-PWY
    • 1 reactions found over 2 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ07303&oldid=133171"