Difference between revisions of "SJ07311"

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(Created page with "Category:gene == Gene SJ16633 == * transcription-direction: ** negative * right-end-position: ** 84831 * left-end-position: ** 59635 * centisome-position: ** 21.39902...")
 
(Created page with "Category:gene == Gene SJ07311 == * transcription-direction: ** negative * right-end-position: ** 79246 * left-end-position: ** 63438 * centisome-position: ** 13.67098...")
 
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ16633 ==
+
== Gene SJ07311 ==
 
* transcription-direction:
 
* transcription-direction:
 
** negative
 
** negative
 
* right-end-position:
 
* right-end-position:
−
** 84831
+
** 79246
 
* left-end-position:
 
* left-end-position:
−
** 59635
+
** 63438
 
* centisome-position:
 
* centisome-position:
−
** 21.39902    
+
** 13.67098    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[RXN0-2161]]
−
* [[ARACHIDONATE-5-LIPOXYGENASE-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[LIPOXYGENASE-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-1321]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[RXN-13395]]
+
* [[SERINE--TRNA-LIGASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-8497]]
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[RXN-8647]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
</div>
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY66-375]]
+
* [[PWY-6281]]
−
** '''5''' reactions found over '''6''' reactions in the full pathway
+
** '''4''' reactions found over '''4''' reactions in the full pathway
−
* [[PWY-5410]]
+
* [[PWY0-901]]
−
** '''2''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-5409]]
 
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY-735]]
 
−
** '''16''' reactions found over '''19''' reactions in the full pathway
 
−
* [[PWY66-392]]
 
−
** '''1''' reactions found over '''11''' reactions in the full pathway
 
−
* [[PWY-6917]]
 
 
** '''2''' reactions found over '''3''' reactions in the full pathway
 
** '''2''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY-5406]]
+
* [[TRNA-CHARGING-PWY]]
−
** '''1''' reactions found over '''4''' reactions in the full pathway
+
** '''21''' reactions found over '''21''' reactions in the full pathway
−
* [[PWY-5407]]
 
−
** '''1''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-5408]]
 
−
** '''1''' reactions found over '''4''' reactions in the full pathway
 
 
{{#set: transcription-direction=negative}}
 
{{#set: transcription-direction=negative}}
−
{{#set: right-end-position=84831}}
+
{{#set: right-end-position=79246}}
−
{{#set: left-end-position=59635}}
+
{{#set: left-end-position=63438}}
−
{{#set: centisome-position=21.39902   }}
+
{{#set: centisome-position=13.67098   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=6}}
+
{{#set: nb reaction associated=2}}
−
{{#set: nb pathway associated=9}}
+
{{#set: nb pathway associated=3}}

Latest revision as of 11:10, 18 March 2021

Gene SJ07311

  • transcription-direction:
    • negative
  • right-end-position:
    • 79246
  • left-end-position:
    • 63438
  • centisome-position:
    • 13.67098

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6281
    • 4 reactions found over 4 reactions in the full pathway
  • PWY0-901
    • 2 reactions found over 3 reactions in the full pathway
  • TRNA-CHARGING-PWY
    • 21 reactions found over 21 reactions in the full pathway




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