Difference between revisions of "SJ07316"
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(Created page with "Category:gene == Gene SJ03668 == * transcription-direction: ** negative * right-end-position: ** 491696 * left-end-position: ** 477233 * centisome-position: ** 91.47003...") |
(Created page with "Category:gene == Gene SJ11169 == * transcription-direction: ** negative * right-end-position: ** 152638 * left-end-position: ** 149960 * centisome-position: ** 39.695583...") |
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Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
− | == Gene | + | == Gene SJ11169 == |
* transcription-direction: | * transcription-direction: | ||
** negative | ** negative | ||
* right-end-position: | * right-end-position: | ||
− | ** | + | ** 152638 |
* left-end-position: | * left-end-position: | ||
− | ** | + | ** 149960 |
* centisome-position: | * centisome-position: | ||
− | ** | + | ** 39.695583 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
− | * [[ | + | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> |
+ | * [[3-HYDROXYISOBUTYRYL-COA-HYDROLASE-RXN]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[ENOYL-COA-DELTA-ISOM-RXN]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[RXN-12519]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[RXN-13721]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[RXN-6384]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[RXN-7836]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[RXN-7931]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
− | + | </div> | |
− | |||
− | |||
− | |||
− | |||
== Pathway(s) associated == | == Pathway(s) associated == | ||
− | + | * [[VALDEG-PWY]] | |
− | * [[ | + | ** '''6''' reactions found over '''8''' reactions in the full pathway |
− | ** ''' | + | * [[PWY-5137]] |
− | * [[PWY- | ||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
** '''1''' reactions found over '''1''' reactions in the full pathway | ** '''1''' reactions found over '''1''' reactions in the full pathway | ||
− | * [[PWY- | + | * [[FAO-PWY]] |
+ | ** '''6''' reactions found over '''7''' reactions in the full pathway | ||
+ | * [[PWY-6837]] | ||
+ | ** '''4''' reactions found over '''5''' reactions in the full pathway | ||
+ | * [[PWY-3941]] | ||
+ | ** '''2''' reactions found over '''6''' reactions in the full pathway | ||
+ | * [[PWY-7574]] | ||
+ | ** '''3''' reactions found over '''5''' reactions in the full pathway | ||
+ | * [[PWY-5138]] | ||
+ | ** '''4''' reactions found over '''5''' reactions in the full pathway | ||
+ | * [[PWY-7291]] | ||
** '''2''' reactions found over '''4''' reactions in the full pathway | ** '''2''' reactions found over '''4''' reactions in the full pathway | ||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
{{#set: transcription-direction=negative}} | {{#set: transcription-direction=negative}} | ||
− | {{#set: right-end-position= | + | {{#set: right-end-position=152638}} |
− | {{#set: left-end-position= | + | {{#set: left-end-position=149960}} |
− | {{#set: centisome-position= | + | {{#set: centisome-position=39.695583 }} |
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
− | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=7}} |
− | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=8}} |
Revision as of 08:18, 15 March 2021
Contents
Gene SJ11169
- transcription-direction:
- negative
- right-end-position:
- 152638
- left-end-position:
- 149960
- centisome-position:
- 39.695583
Organism(s) associated with this gene
Reaction(s) associated
- 3-HYDROXYISOBUTYRYL-COA-HYDROLASE-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- ENOYL-COA-DELTA-ISOM-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-12519
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-13721
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-6384
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-7836
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-7931
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
Pathway(s) associated
- VALDEG-PWY
- 6 reactions found over 8 reactions in the full pathway
- PWY-5137
- 1 reactions found over 1 reactions in the full pathway
- FAO-PWY
- 6 reactions found over 7 reactions in the full pathway
- PWY-6837
- 4 reactions found over 5 reactions in the full pathway
- PWY-3941
- 2 reactions found over 6 reactions in the full pathway
- PWY-7574
- 3 reactions found over 5 reactions in the full pathway
- PWY-5138
- 4 reactions found over 5 reactions in the full pathway
- PWY-7291
- 2 reactions found over 4 reactions in the full pathway