Difference between revisions of "SJ07317"

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(Created page with "Category:gene == Gene SJ10416 == * transcription-direction: ** negative * right-end-position: ** 102533 * left-end-position: ** 77700 * centisome-position: ** 19.84056...")
(Created page with "Category:gene == Gene SJ04180 == * transcription-direction: ** positive * right-end-position: ** 309446 * left-end-position: ** 302294 * centisome-position: ** 58.564587...")
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ10416 ==
+
== Gene SJ04180 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 102533
+
** 309446
 
* left-end-position:
 
* left-end-position:
−
** 77700
+
** 302294
 
* centisome-position:
 
* centisome-position:
−
** 19.84056    
+
** 58.564587    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
−
* [[S.japonica_sterols_curated]]
+
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[3.1.11.1-RXN]]
−
* [[RXN-14918]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-14919]]
+
{{#set: transcription-direction=positive}}
−
** Category: [[annotation]]
+
{{#set: right-end-position=309446}}
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
{{#set: left-end-position=302294}}
−
* [[RXN-2542]]
+
{{#set: centisome-position=58.564587   }}
−
** Category: [[annotation]]
+
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
{{#set: nb reaction associated=1}}
−
* [[RXN-2562]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[TOCOPHEROL-O-METHYLTRANSFERASE-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
</div>
 
−
== Pathway(s) associated ==
 
−
* [[PWY-7436]]
 
−
** '''4''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-1422]]
 
−
** '''5''' reactions found over '''7''' reactions in the full pathway
 
−
{{#set: transcription-direction=negative}}
 
−
{{#set: right-end-position=102533}}
 
−
{{#set: left-end-position=77700}}
 
−
{{#set: centisome-position=19.84056   }}
 
−
{{#set: organism associated=S.japonica_sterols_curated}}
 
−
{{#set: nb reaction associated=5}}
 
−
{{#set: nb pathway associated=2}}
 

Revision as of 14:50, 5 January 2021

Gene SJ04180

  • transcription-direction:
    • positive
  • right-end-position:
    • 309446
  • left-end-position:
    • 302294
  • centisome-position:
    • 58.564587

Organism(s) associated with this gene

Reaction(s) associated




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ07317&oldid=56876"