Difference between revisions of "SJ07318"

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(Created page with "Category:gene == Gene SJ14940 == * transcription-direction: ** positive * right-end-position: ** 264346 * left-end-position: ** 254595 * centisome-position: ** 83.66579...")
(Created page with "Category:gene == Gene SJ20588 == * transcription-direction: ** negative * right-end-position: ** 106663 * left-end-position: ** 99683 * centisome-position: ** 48.47287...")
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[[Category:gene]]
 
[[Category:gene]]
== Gene SJ14940 ==
+
== Gene SJ20588 ==
 
* transcription-direction:
 
* transcription-direction:
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
** 264346
+
** 106663
 
* left-end-position:
 
* left-end-position:
** 254595
+
** 99683
 
* centisome-position:
 
* centisome-position:
** 83.66579    
+
** 48.47287    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
* [[ATPASE-RXN]]
+
* [[3.1.3.16-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
+
* [[4-NITROPHENYLPHOSPHATASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
* [[RXN-12195]]
+
* [[PROTEIN-TYROSINE-PHOSPHATASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
* [[RXN-12196]]
+
** Category: [[orthology]]
** Category: [[annotation]]
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
{{#set: transcription-direction=negative}}
* [[RXN0-5462]]
+
{{#set: right-end-position=106663}}
** Category: [[annotation]]
+
{{#set: left-end-position=99683}}
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
{{#set: centisome-position=48.47287   }}
== Pathway(s) associated ==
 
* [[PWY-7210]]
 
** '''8''' reactions found over '''8''' reactions in the full pathway
 
* [[PWY-7198]]
 
** '''6''' reactions found over '''7''' reactions in the full pathway
 
* [[PWY-7184]]
 
** '''9''' reactions found over '''9''' reactions in the full pathway
 
* [[PWY-6545]]
 
** '''8''' reactions found over '''9''' reactions in the full pathway
 
{{#set: transcription-direction=positive}}
 
{{#set: right-end-position=264346}}
 
{{#set: left-end-position=254595}}
 
{{#set: centisome-position=83.66579   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
{{#set: nb reaction associated=5}}
+
{{#set: nb reaction associated=3}}
{{#set: nb pathway associated=4}}
 

Revision as of 15:21, 5 January 2021

Gene SJ20588

  • transcription-direction:
    • negative
  • right-end-position:
    • 106663
  • left-end-position:
    • 99683
  • centisome-position:
    • 48.47287

Organism(s) associated with this gene

Reaction(s) associated