Difference between revisions of "SJ07373"

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(Created page with "Category:gene == Gene SJ15938 == * transcription-direction: ** negative * right-end-position: ** 101629 * left-end-position: ** 97997 * centisome-position: ** 33.863182...")
(Created page with "Category:gene == Gene SJ00485 == * transcription-direction: ** positive * right-end-position: ** 118882 * left-end-position: ** 102950 * centisome-position: ** 61.840748...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ15938 ==
+
== Gene SJ00485 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 101629
+
** 118882
 
* left-end-position:
 
* left-end-position:
−
** 97997
+
** 102950
 
* centisome-position:
 
* centisome-position:
−
** 33.863182    
+
** 61.840748    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[CYSTATHIONINE-BETA-SYNTHASE-RXN]]
+
* [[ACETYL-COA-CARBOXYLTRANSFER-RXN]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[BIOTIN-CARBOXYL-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[PYRUVATE-CARBOXYLASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[HOMOCYSDEGR-PWY]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
** '''2''' reactions found over '''4''' reactions in the full pathway
+
* [[PWY-7388]]
−
* [[PWY-I9]]
+
** '''7''' reactions found over '''9''' reactions in the full pathway
−
** '''4''' reactions found over '''5''' reactions in the full pathway
+
* [[PWY-6679]]
−
* [[PWY-801]]
+
** '''1''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-5744]]
 +
** '''4''' reactions found over '''13''' reactions in the full pathway
 +
* [[PWY-5743]]
 +
** '''5''' reactions found over '''13''' reactions in the full pathway
 +
* [[PWY-5789]]
 +
** '''8''' reactions found over '''18''' reactions in the full pathway
 +
* [[PWY0-1264]]
 
** '''3''' reactions found over '''4''' reactions in the full pathway
 
** '''3''' reactions found over '''4''' reactions in the full pathway
−
{{#set: transcription-direction=negative}}
+
* [[PWY-5750]]
−
{{#set: right-end-position=101629}}
+
** '''3''' reactions found over '''2''' reactions in the full pathway
−
{{#set: left-end-position=97997}}
+
* [[P42-PWY]]
−
{{#set: centisome-position=33.863182   }}
+
** '''5''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY66-399]]
 +
** '''11''' reactions found over '''12''' reactions in the full pathway
 +
* [[PWY-6146]]
 +
** '''9''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-6142]]
 +
** '''10''' reactions found over '''13''' reactions in the full pathway
 +
</div>
 +
{{#set: transcription-direction=positive}}
 +
{{#set: right-end-position=118882}}
 +
{{#set: left-end-position=102950}}
 +
{{#set: centisome-position=61.840748   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=1}}
+
{{#set: nb reaction associated=3}}
−
{{#set: nb pathway associated=3}}
+
{{#set: nb pathway associated=11}}

Revision as of 09:26, 27 August 2019

Gene SJ00485

  • transcription-direction:
    • positive
  • right-end-position:
    • 118882
  • left-end-position:
    • 102950
  • centisome-position:
    • 61.840748

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7388
    • 7 reactions found over 9 reactions in the full pathway
  • PWY-6679
    • 1 reactions found over 9 reactions in the full pathway
  • PWY-5744
    • 4 reactions found over 13 reactions in the full pathway
  • PWY-5743
    • 5 reactions found over 13 reactions in the full pathway
  • PWY-5789
    • 8 reactions found over 18 reactions in the full pathway
  • PWY0-1264
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-5750
    • 3 reactions found over 2 reactions in the full pathway
  • P42-PWY
    • 5 reactions found over 7 reactions in the full pathway
  • PWY66-399
    • 11 reactions found over 12 reactions in the full pathway
  • PWY-6146
    • 9 reactions found over 2 reactions in the full pathway
  • PWY-6142
    • 10 reactions found over 13 reactions in the full pathway




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