Difference between revisions of "SJ07399"

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(Created page with "Category:gene == Gene SJ19906 == * transcription-direction: ** positive * right-end-position: ** 292664 * left-end-position: ** 280459 * centisome-position: ** 44.940815...")
(Created page with "Category:gene == Gene SJ07399 == * transcription-direction: ** negative * right-end-position: ** 44013 * left-end-position: ** 34598 * centisome-position: ** 50.848007...")
 
(4 intermediate revisions by one other user not shown)
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[[Category:gene]]
 
[[Category:gene]]
== Gene SJ19906 ==
+
== Gene SJ07399 ==
 
* transcription-direction:
 
* transcription-direction:
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
** 292664
+
** 44013
 
* left-end-position:
 
* left-end-position:
** 280459
+
** 34598
 
* centisome-position:
 
* centisome-position:
** 44.940815    
+
** 50.848007    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
* [[GLUCOKIN-RXN]]
+
* [[2.4.1.223-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
* [[HEXOKINASE-RXN]]
+
* [[2.4.2.26-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[PWY-6558]]
* [[PWY-2723]]
+
** '''7''' reactions found over '''13''' reactions in the full pathway
** '''2''' reactions found over '''3''' reactions in the full pathway
+
* [[PWY-6557]]
* [[PWY0-1182]]
+
** '''2''' reactions found over '''4''' reactions in the full pathway
** '''2''' reactions found over '''2''' reactions in the full pathway
+
{{#set: transcription-direction=negative}}
* [[P122-PWY]]
+
{{#set: right-end-position=44013}}
** '''16''' reactions found over '''18''' reactions in the full pathway
+
{{#set: left-end-position=34598}}
* [[PWY-5661]]
+
{{#set: centisome-position=50.848007   }}
** '''2''' reactions found over '''3''' reactions in the full pathway
 
* [[GLYCOCAT-PWY]]
 
** '''6''' reactions found over '''8''' reactions in the full pathway
 
* [[PWY-7238]]
 
** '''5''' reactions found over '''8''' reactions in the full pathway
 
* [[P124-PWY]]
 
** '''12''' reactions found over '''15''' reactions in the full pathway
 
* [[GLUCOSE1PMETAB-PWY]]
 
** '''3''' reactions found over '''5''' reactions in the full pathway
 
* [[PWY-7385]]
 
** '''7''' reactions found over '''9''' reactions in the full pathway
 
* [[PWY-2722]]
 
** '''1''' reactions found over '''3''' reactions in the full pathway
 
* [[TREDEGLOW-PWY]]
 
** '''1''' reactions found over '''2''' reactions in the full pathway
 
* [[PWY-621]]
 
** '''3''' reactions found over '''4''' reactions in the full pathway
 
* [[ANAGLYCOLYSIS-PWY]]
 
** '''10''' reactions found over '''11''' reactions in the full pathway
 
* [[PWY-5514]]
 
** '''5''' reactions found over '''7''' reactions in the full pathway
 
</div>
 
{{#set: transcription-direction=positive}}
 
{{#set: right-end-position=292664}}
 
{{#set: left-end-position=280459}}
 
{{#set: centisome-position=44.940815   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: nb reaction associated=2}}
 
{{#set: nb reaction associated=2}}
{{#set: nb pathway associated=14}}
+
{{#set: nb pathway associated=2}}

Latest revision as of 11:01, 18 March 2021

Gene SJ07399

  • transcription-direction:
    • negative
  • right-end-position:
    • 44013
  • left-end-position:
    • 34598
  • centisome-position:
    • 50.848007

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6558
    • 7 reactions found over 13 reactions in the full pathway
  • PWY-6557
    • 2 reactions found over 4 reactions in the full pathway