Difference between revisions of "SJ07403"

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(Created page with "Category:gene == Gene SJ05357 == * transcription-direction: ** negative * right-end-position: ** 293019 * left-end-position: ** 288900 * centisome-position: ** 58.19716...")
(Created page with "Category:gene == Gene SJ15734 == * transcription-direction: ** positive * right-end-position: ** 88338 * left-end-position: ** 77688 * centisome-position: ** 26.633024...")
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[[Category:gene]]
 
[[Category:gene]]
== Gene SJ05357 ==
+
== Gene SJ15734 ==
 
* transcription-direction:
 
* transcription-direction:
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
** 293019
+
** 88338
 
* left-end-position:
 
* left-end-position:
** 288900
+
** 77688
 
* centisome-position:
 
* centisome-position:
** 58.19716    
+
** 26.633024    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[RXN-9839]]
* [[HOMOSERDEAM-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
* [[LCYSDESULF-RXN]]
+
** Category: [[orthology]]
** Category: [[annotation]]
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[O-SUCCHOMOSERLYASE-RXN]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-14048]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-14049]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-15129]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-15130]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
</div>
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
* [[PWY66-426]]
+
* [[PWY-6082]]
** '''2''' reactions found over '''6''' reactions in the full pathway
+
** '''3''' reactions found over '''7''' reactions in the full pathway
* [[PWY-I9]]
+
* [[PWY-6073]]
** '''4''' reactions found over '''5''' reactions in the full pathway
+
** '''3''' reactions found over '''3''' reactions in the full pathway
* [[PWY-801]]
+
{{#set: transcription-direction=positive}}
** '''3''' reactions found over '''4''' reactions in the full pathway
+
{{#set: right-end-position=88338}}
* [[HOMOSER-METSYN-PWY]]
+
{{#set: left-end-position=77688}}
** '''4''' reactions found over '''7''' reactions in the full pathway
+
{{#set: centisome-position=26.633024   }}
* [[HOMOCYSDEGR-PWY]]
 
** '''2''' reactions found over '''2''' reactions in the full pathway
 
* [[LCYSDEG-PWY]]
 
** '''1''' reactions found over '''3''' reactions in the full pathway
 
{{#set: transcription-direction=negative}}
 
{{#set: right-end-position=293019}}
 
{{#set: left-end-position=288900}}
 
{{#set: centisome-position=58.19716   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
{{#set: nb reaction associated=7}}
+
{{#set: nb reaction associated=1}}
{{#set: nb pathway associated=6}}
+
{{#set: nb pathway associated=2}}

Revision as of 18:49, 14 January 2021

Gene SJ15734

  • transcription-direction:
    • positive
  • right-end-position:
    • 88338
  • left-end-position:
    • 77688
  • centisome-position:
    • 26.633024

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6082
    • 3 reactions found over 7 reactions in the full pathway
  • PWY-6073
    • 3 reactions found over 3 reactions in the full pathway