Difference between revisions of "SJ07446"

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(Created page with "Category:gene == Gene SJ16261 == * transcription-direction: ** negative * right-end-position: ** 138644 * left-end-position: ** 125989 * centisome-position: ** 18.268806...")
(Created page with "Category:gene == Gene SJ18090 == * transcription-direction: ** negative * right-end-position: ** 265781 * left-end-position: ** 265233 * centisome-position: ** 75.26988...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ16261 ==
+
== Gene SJ18090 ==
 
* transcription-direction:
 
* transcription-direction:
 
** negative
 
** negative
 
* right-end-position:
 
* right-end-position:
−
** 138644
+
** 265781
 
* left-end-position:
 
* left-end-position:
−
** 125989
+
** 265233
 
* centisome-position:
 
* centisome-position:
−
** 18.268806    
+
** 75.26988    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[ATPASE-RXN]]
−
* [[DIACYLGLYKIN-RXN]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[NAD-KIN-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-11376]]
+
* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN3DJ-11417]]
+
* [[RXN-12195]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
* [[RXN-12196]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN3O-458]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[SPHINGANINE-KINASE-RXN]]
+
* [[RXN0-5462]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
</div>
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[PWY-7210]]
−
* [[PWY-7039]]
+
** '''8''' reactions found over '''8''' reactions in the full pathway
−
** '''4''' reactions found over '''5''' reactions in the full pathway
+
* [[PWY-7198]]
−
* [[PWY-7817]]
+
** '''6''' reactions found over '''7''' reactions in the full pathway
−
** '''6''' reactions found over '''16''' reactions in the full pathway
+
* [[PWY-7184]]
−
* [[NADPHOS-DEPHOS-PWY-1]]
+
** '''9''' reactions found over '''9''' reactions in the full pathway
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
* [[PWY-6545]]
−
* [[PWY-7269]]
+
** '''8''' reactions found over '''9''' reactions in the full pathway
−
** '''5''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-7268]]
 
−
** '''4''' reactions found over '''5''' reactions in the full pathway
 
−
* [[NADPHOS-DEPHOS-PWY]]
 
−
** '''3''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-5083]]
 
−
** '''5''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-6483]]
 
−
** '''1''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY3DJ-11470]]
 
−
** '''3''' reactions found over '''10''' reactions in the full pathway
 
−
* [[PWY-7119]]
 
−
** '''4''' reactions found over '''16''' reactions in the full pathway
 
−
* [[PWY-5129]]
 
−
** '''4''' reactions found over '''13''' reactions in the full pathway
 
−
</div>
 
 
{{#set: transcription-direction=negative}}
 
{{#set: transcription-direction=negative}}
−
{{#set: right-end-position=138644}}
+
{{#set: right-end-position=265781}}
−
{{#set: left-end-position=125989}}
+
{{#set: left-end-position=265233}}
−
{{#set: centisome-position=18.268806   }}
+
{{#set: centisome-position=75.26988   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=6}}
+
{{#set: nb reaction associated=5}}
−
{{#set: nb pathway associated=11}}
+
{{#set: nb pathway associated=4}}

Revision as of 11:08, 15 January 2021

Gene SJ18090

  • transcription-direction:
    • negative
  • right-end-position:
    • 265781
  • left-end-position:
    • 265233
  • centisome-position:
    • 75.26988

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7210
    • 8 reactions found over 8 reactions in the full pathway
  • PWY-7198
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-7184
    • 9 reactions found over 9 reactions in the full pathway
  • PWY-6545
    • 8 reactions found over 9 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ07446&oldid=108480"