Difference between revisions of "SJ07446"

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(Created page with "Category:gene == Gene SJ06007 == * transcription-direction: ** positive * right-end-position: ** 56361 * left-end-position: ** 52568 * centisome-position: ** 10.883914...")
(Created page with "Category:gene == Gene SJ16261 == * transcription-direction: ** negative * right-end-position: ** 138644 * left-end-position: ** 125989 * centisome-position: ** 18.268806...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ06007 ==
+
== Gene SJ16261 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 56361
+
** 138644
 
* left-end-position:
 
* left-end-position:
−
** 52568
+
** 125989
 
* centisome-position:
 
* centisome-position:
−
** 10.883914    
+
** 18.268806    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[3.1.3.16-RXN]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* [[DIACYLGLYKIN-RXN]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[NAD-KIN-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[4-NITROPHENYLPHOSPHATASE-RXN]]
+
* [[RXN-11376]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-17131]]
+
* [[RXN3DJ-11417]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-17132]]
+
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN3O-458]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-17133]]
+
* [[SPHINGANINE-KINASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
{{#set: transcription-direction=positive}}
+
</div>
−
{{#set: right-end-position=56361}}
+
== Pathway(s) associated ==
−
{{#set: left-end-position=52568}}
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
{{#set: centisome-position=10.883914   }}
+
* [[PWY-7039]]
 +
** '''4''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-7817]]
 +
** '''6''' reactions found over '''16''' reactions in the full pathway
 +
* [[NADPHOS-DEPHOS-PWY-1]]
 +
** '''2''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-7269]]
 +
** '''5''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-7268]]
 +
** '''4''' reactions found over '''5''' reactions in the full pathway
 +
* [[NADPHOS-DEPHOS-PWY]]
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-5083]]
 +
** '''5''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-6483]]
 +
** '''1''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY3DJ-11470]]
 +
** '''3''' reactions found over '''10''' reactions in the full pathway
 +
* [[PWY-7119]]
 +
** '''4''' reactions found over '''16''' reactions in the full pathway
 +
* [[PWY-5129]]
 +
** '''4''' reactions found over '''13''' reactions in the full pathway
 +
</div>
 +
{{#set: transcription-direction=negative}}
 +
{{#set: right-end-position=138644}}
 +
{{#set: left-end-position=125989}}
 +
{{#set: centisome-position=18.268806   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=5}}
+
{{#set: nb reaction associated=6}}
 +
{{#set: nb pathway associated=11}}

Revision as of 18:48, 14 January 2021

Gene SJ16261

  • transcription-direction:
    • negative
  • right-end-position:
    • 138644
  • left-end-position:
    • 125989
  • centisome-position:
    • 18.268806

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7039
    • 4 reactions found over 5 reactions in the full pathway
  • PWY-7817
    • 6 reactions found over 16 reactions in the full pathway
  • NADPHOS-DEPHOS-PWY-1
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-7269
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-7268
    • 4 reactions found over 5 reactions in the full pathway
  • NADPHOS-DEPHOS-PWY
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-5083
    • 5 reactions found over 6 reactions in the full pathway
  • PWY-6483
    • 1 reactions found over 3 reactions in the full pathway
  • PWY3DJ-11470
    • 3 reactions found over 10 reactions in the full pathway
  • PWY-7119
    • 4 reactions found over 16 reactions in the full pathway
  • PWY-5129
    • 4 reactions found over 13 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ07446&oldid=95452"