Difference between revisions of "SJ07452"

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(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-12853 CPD-12853] == * common-name: ** 4α-methyl-5α-cholesta-8,14,24-trien-3&bet...")
 
(Created page with "Category:gene == Gene SJ07452 == * transcription-direction: ** negative * right-end-position: ** 199052 * left-end-position: ** 193487 * centisome-position: ** 42.490158...")
 
(9 intermediate revisions by 5 users not shown)
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[[Category:metabolite]]
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[[Category:gene]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-12853 CPD-12853] ==
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== Gene SJ07452 ==
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* common-name:
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* transcription-direction:
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** 4α-methyl-5α-cholesta-8,14,24-trien-3β-ol
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** negative
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* smiles:
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* right-end-position:
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** cc(c)=cccc(c)[ch]3(cc=c4(c2(cc[ch]1(c(c)c(o)ccc(c)1c=2ccc(c)34))))
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** 199052
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* inchi-key:
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* left-end-position:
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** qjvmeazhjkxwjd-hesbynjasa-n
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** 193487
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* molecular-weight:
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* centisome-position:
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** 396.655
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** 42.490158   
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== Reaction(s) known to consume the compound ==
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== Organism(s) associated with this gene  ==
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== Reaction(s) known to produce the compound ==
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* [[S.japonica_carotenoid_curated]]
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* [[RXN-11881]]
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== Reaction(s) associated ==
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== Reaction(s) of unknown directionality ==
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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{{#set: common-name=4&alpha;-methyl-5&alpha;-cholesta-8,14,24-trien-3&beta;-ol}}
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* [[1.17.99.3-RXN]]
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{{#set: inchi-key=inchikey=qjvmeazhjkxwjd-hesbynjasa-n}}
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** Category: [[annotation]]
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{{#set: molecular-weight=396.655}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[ACYLCOADEHYDROG-RXN]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[LONG-CHAIN-FATTY-ACYL-COA-REDUCTASE-RXN]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-10696]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-10706]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-10707]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-11026]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-12518]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-12669]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-14576]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-14771]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-14775]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-14785]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-14789]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-14796]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-16134]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-17113]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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</div>
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== Pathway(s) associated ==
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* [[FAO-PWY]]
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** '''6''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-735]]
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** '''16''' reactions found over '''19''' reactions in the full pathway
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* [[PWY-7007]]
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** '''4''' reactions found over '''6''' reactions in the full pathway
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* [[PWY-7288]]
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** '''4''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-5136]]
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** '''5''' reactions found over '''5''' reactions in the full pathway
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* [[PWY66-391]]
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** '''6''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-6837]]
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** '''4''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-6920]]
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** '''5''' reactions found over '''6''' reactions in the full pathway
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* [[PWY-7291]]
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** '''2''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-7337]]
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** '''6''' reactions found over '''12''' reactions in the full pathway
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* [[PWY-7338]]
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** '''6''' reactions found over '''12''' reactions in the full pathway
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* [[PWY-7340]]
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** '''5''' reactions found over '''10''' reactions in the full pathway
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* [[PWY-7606]]
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** '''8''' reactions found over '''14''' reactions in the full pathway
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* [[PWY-7726]]
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** '''8''' reactions found over '''13''' reactions in the full pathway
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</div>
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{{#set: transcription-direction=negative}}
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{{#set: right-end-position=199052}}
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{{#set: left-end-position=193487}}
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{{#set: centisome-position=42.490158    }}
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{{#set: organism associated=S.japonica_carotenoid_curated}}
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{{#set: nb reaction associated=17}}
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{{#set: nb pathway associated=14}}

Latest revision as of 11:01, 18 March 2021

Gene SJ07452

  • transcription-direction:
    • negative
  • right-end-position:
    • 199052
  • left-end-position:
    • 193487
  • centisome-position:
    • 42.490158

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • FAO-PWY
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-735
    • 16 reactions found over 19 reactions in the full pathway
  • PWY-7007
    • 4 reactions found over 6 reactions in the full pathway
  • PWY-7288
    • 4 reactions found over 5 reactions in the full pathway
  • PWY-5136
    • 5 reactions found over 5 reactions in the full pathway
  • PWY66-391
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-6837
    • 4 reactions found over 5 reactions in the full pathway
  • PWY-6920
    • 5 reactions found over 6 reactions in the full pathway
  • PWY-7291
    • 2 reactions found over 4 reactions in the full pathway
  • PWY-7337
    • 6 reactions found over 12 reactions in the full pathway
  • PWY-7338
    • 6 reactions found over 12 reactions in the full pathway
  • PWY-7340
    • 5 reactions found over 10 reactions in the full pathway
  • PWY-7606
    • 8 reactions found over 14 reactions in the full pathway
  • PWY-7726
    • 8 reactions found over 13 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ07452&oldid=131930"