Difference between revisions of "SJ07454"

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(Created page with "Category:gene == Gene SJ21513 == * transcription-direction: ** positive * right-end-position: ** 171648 * left-end-position: ** 165718 * centisome-position: ** 87.023506...")
(Created page with "Category:gene == Gene SJ07454 == * transcription-direction: ** negative * right-end-position: ** 254765 * left-end-position: ** 240628 * centisome-position: ** 52.84242...")
 
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[[Category:gene]]
 
[[Category:gene]]
== Gene SJ21513 ==
+
== Gene SJ07454 ==
 
* transcription-direction:
 
* transcription-direction:
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
** 171648
+
** 254765
 
* left-end-position:
 
* left-end-position:
** 165718
+
** 240628
 
* centisome-position:
 
* centisome-position:
** 87.023506    
+
** 52.84242    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
* [[F16ALDOLASE-RXN]]
+
* [[RXN-14430]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* [[RXN-8631]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[PWY-7255]]
* [[CALVIN-PWY]]
+
** '''2''' reactions found over '''7''' reactions in the full pathway
** '''12''' reactions found over '''13''' reactions in the full pathway
+
{{#set: transcription-direction=negative}}
* [[GLUCONEO-PWY]]
+
{{#set: right-end-position=254765}}
** '''12''' reactions found over '''13''' reactions in the full pathway
+
{{#set: left-end-position=240628}}
* [[PWY-7385]]
+
{{#set: centisome-position=52.84242   }}
** '''7''' reactions found over '''9''' reactions in the full pathway
 
* [[P341-PWY]]
 
** '''6''' reactions found over '''10''' reactions in the full pathway
 
* [[GLYCOLYSIS]]
 
** '''11''' reactions found over '''12''' reactions in the full pathway
 
* [[ANAGLYCOLYSIS-PWY]]
 
** '''10''' reactions found over '''11''' reactions in the full pathway
 
* [[PWY66-399]]
 
** '''11''' reactions found over '''12''' reactions in the full pathway
 
* [[PWY-1042]]
 
** '''9''' reactions found over '''10''' reactions in the full pathway
 
* [[SUCSYN-PWY]]
 
** '''6''' reactions found over '''7''' reactions in the full pathway
 
* [[P185-PWY]]
 
** '''11''' reactions found over '''12''' reactions in the full pathway
 
* [[PWY-1861]]
 
** '''7''' reactions found over '''9''' reactions in the full pathway
 
* [[PWY-5484]]
 
** '''10''' reactions found over '''11''' reactions in the full pathway
 
* [[PWY-6142]]
 
** '''10''' reactions found over '''13''' reactions in the full pathway
 
* [[PWY66-373]]
 
** '''3''' reactions found over '''5''' reactions in the full pathway
 
</div>
 
{{#set: transcription-direction=positive}}
 
{{#set: right-end-position=171648}}
 
{{#set: left-end-position=165718}}
 
{{#set: centisome-position=87.023506   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
{{#set: nb reaction associated=2}}
+
{{#set: nb reaction associated=1}}
{{#set: nb pathway associated=14}}
+
{{#set: nb pathway associated=1}}

Latest revision as of 11:03, 18 March 2021

Gene SJ07454

  • transcription-direction:
    • negative
  • right-end-position:
    • 254765
  • left-end-position:
    • 240628
  • centisome-position:
    • 52.84242

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7255
    • 2 reactions found over 7 reactions in the full pathway