Difference between revisions of "SJ07541"
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(Created page with "Category:gene == Gene SJ13076 == * transcription-direction: ** negative * right-end-position: ** 9955 * left-end-position: ** 9245 * centisome-position: ** 66.12546 ==...") |
(Created page with "Category:gene == Gene SJ07541 == * transcription-direction: ** positive * right-end-position: ** 6540 * left-end-position: ** 4044 * centisome-position: ** 0.89073515...") |
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(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
− | == Gene | + | == Gene SJ07541 == |
* transcription-direction: | * transcription-direction: | ||
− | ** | + | ** positive |
* right-end-position: | * right-end-position: | ||
− | ** | + | ** 6540 |
* left-end-position: | * left-end-position: | ||
− | ** | + | ** 4044 |
* centisome-position: | * centisome-position: | ||
− | ** | + | ** 0.89073515 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
− | * [[ | + | * [[PORPHOBILSYNTH-RXN]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | ** Category: [[orthology]] | ||
+ | *** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | ||
+ | *** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a | ||
+ | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
== Pathway(s) associated == | == Pathway(s) associated == | ||
− | * [[ | + | * [[PWY-5188]] |
− | ** ''' | + | ** '''6''' reactions found over '''6''' reactions in the full pathway |
− | {{#set: transcription-direction= | + | * [[PWY-5189]] |
− | {{#set: right-end-position= | + | ** '''3''' reactions found over '''4''' reactions in the full pathway |
− | {{#set: left-end-position= | + | {{#set: transcription-direction=positive}} |
− | {{#set: centisome-position= | + | {{#set: right-end-position=6540}} |
+ | {{#set: left-end-position=4044}} | ||
+ | {{#set: centisome-position=0.89073515 }} | ||
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
{{#set: nb reaction associated=1}} | {{#set: nb reaction associated=1}} | ||
− | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=2}} |
Latest revision as of 11:10, 18 March 2021
Contents
Gene SJ07541
- transcription-direction:
- positive
- right-end-position:
- 6540
- left-end-position:
- 4044
- centisome-position:
- 0.89073515
Organism(s) associated with this gene
Reaction(s) associated
- PORPHOBILSYNTH-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
Pathway(s) associated
- PWY-5188
- 6 reactions found over 6 reactions in the full pathway
- PWY-5189
- 3 reactions found over 4 reactions in the full pathway