Difference between revisions of "SJ07569"

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(Created page with "Category:gene == Gene SJ08123 == * transcription-direction: ** positive * right-end-position: ** 52004 * left-end-position: ** 43180 * centisome-position: ** 9.700188...")
 
(Created page with "Category:gene == Gene SJ02199 == * transcription-direction: ** negative * right-end-position: ** 47139 * left-end-position: ** 38520 * centisome-position: ** 7.0873313...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ08123 ==
+
== Gene SJ02199 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 52004
+
** 47139
 
* left-end-position:
 
* left-end-position:
−
** 43180
+
** 38520
 
* centisome-position:
 
* centisome-position:
−
** 9.700188    
+
** 7.0873313    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[PMPOXI-RXN]]
+
* [[PEROXID-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
* [[RXN-14240]]
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
+
** Category: [[annotation]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[PNPOXI-RXN]]
+
* [[RXN-15288]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-17352]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-8635]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[PYRIDOXINE-4-OXIDASE-RXN]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PLPSAL-PWY]]
+
* [[PWY-7214]]
−
** '''5''' reactions found over '''5''' reactions in the full pathway
+
** '''1''' reactions found over '''2''' reactions in the full pathway
−
* [[PWY-7204]]
+
* [[PWY-7445]]
−
** '''9''' reactions found over '''9''' reactions in the full pathway
+
** '''1''' reactions found over '''4''' reactions in the full pathway
−
* [[PYRIDOXSYN-PWY]]
+
* [[PWY-5466]]
−
** '''3''' reactions found over '''7''' reactions in the full pathway
+
** '''2''' reactions found over '''10''' reactions in the full pathway
−
* [[PWY-7282]]
+
* [[PWY-6824]]
−
** '''6''' reactions found over '''9''' reactions in the full pathway
+
** '''2''' reactions found over '''10''' reactions in the full pathway
−
* [[PWY-5499]]
+
* [[PWY-5469]]
−
** '''1''' reactions found over '''9''' reactions in the full pathway
+
** '''2''' reactions found over '''8''' reactions in the full pathway
−
{{#set: transcription-direction=positive}}
+
* [[PWY-5461]]
−
{{#set: right-end-position=52004}}
+
** '''1''' reactions found over '''1''' reactions in the full pathway
−
{{#set: left-end-position=43180}}
+
{{#set: transcription-direction=negative}}
−
{{#set: centisome-position=9.700188   }}
+
{{#set: right-end-position=47139}}
 +
{{#set: left-end-position=38520}}
 +
{{#set: centisome-position=7.0873313   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=3}}
+
{{#set: nb reaction associated=5}}
−
{{#set: nb pathway associated=5}}
+
{{#set: nb pathway associated=6}}

Revision as of 14:21, 26 August 2019

Gene SJ02199

  • transcription-direction:
    • negative
  • right-end-position:
    • 47139
  • left-end-position:
    • 38520
  • centisome-position:
    • 7.0873313

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7214
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-7445
    • 1 reactions found over 4 reactions in the full pathway
  • PWY-5466
    • 2 reactions found over 10 reactions in the full pathway
  • PWY-6824
    • 2 reactions found over 10 reactions in the full pathway
  • PWY-5469
    • 2 reactions found over 8 reactions in the full pathway
  • PWY-5461
    • 1 reactions found over 1 reactions in the full pathway




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