Difference between revisions of "SJ07620"
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(Created page with "Category:gene == Gene SJ06911 == * transcription-direction: ** positive * right-end-position: ** 32975 * left-end-position: ** 21259 * centisome-position: ** 29.17267...") |
(Created page with "Category:gene == Gene SJ21565 == * transcription-direction: ** positive * right-end-position: ** 409098 * left-end-position: ** 390894 * centisome-position: ** 65.67693...") |
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| Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
| − | == Gene | + | == Gene SJ21565 == |
* transcription-direction: | * transcription-direction: | ||
** positive | ** positive | ||
* right-end-position: | * right-end-position: | ||
| − | ** | + | ** 409098 |
* left-end-position: | * left-end-position: | ||
| − | ** | + | ** 390894 |
* centisome-position: | * centisome-position: | ||
| − | ** | + | ** 65.67693 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
| − | + | * [[3.1.3.16-RXN]] | |
| − | * [[ | ||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| − | * [[ | + | * [[4-NITROPHENYLPHOSPHATASE-RXN]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| − | |||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
| − | * [[RXN | + | * [[PHOSPHATIDYLINOSITOL-3-PHOSPHATASE-RXN]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| − | * [[RXN | + | * [[PROTEIN-TYROSINE-PHOSPHATASE-RXN]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| − | * [[ | + | * [[RXN-10958]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| − | |||
== Pathway(s) associated == | == Pathway(s) associated == | ||
| − | * [[PWY- | + | * [[PWY-6368]] |
| − | + | ** '''6''' reactions found over '''9''' reactions in the full pathway | |
| − | + | * [[PWY-6580]] | |
| − | ** '''6''' reactions found over ''' | + | ** '''2''' reactions found over '''3''' reactions in the full pathway |
| − | * [[PWY- | + | * [[PWY-6367]] |
| − | ** ''' | + | ** '''2''' reactions found over '''4''' reactions in the full pathway |
| − | * [[PWY- | ||
| − | ** ''' | ||
{{#set: transcription-direction=positive}} | {{#set: transcription-direction=positive}} | ||
| − | {{#set: right-end-position= | + | {{#set: right-end-position=409098}} |
| − | {{#set: left-end-position= | + | {{#set: left-end-position=390894}} |
| − | {{#set: centisome-position= | + | {{#set: centisome-position=65.67693 }} |
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
| − | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=5}} |
| − | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=3}} |
Revision as of 09:25, 27 August 2019
Contents
Gene SJ21565
- transcription-direction:
- positive
- right-end-position:
- 409098
- left-end-position:
- 390894
- centisome-position:
- 65.67693
Organism(s) associated with this gene
Reaction(s) associated
- 3.1.3.16-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- 4-NITROPHENYLPHOSPHATASE-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
- PHOSPHATIDYLINOSITOL-3-PHOSPHATASE-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- PROTEIN-TYROSINE-PHOSPHATASE-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-10958
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
Pathway(s) associated
- PWY-6368
- 6 reactions found over 9 reactions in the full pathway
- PWY-6580
- 2 reactions found over 3 reactions in the full pathway
- PWY-6367
- 2 reactions found over 4 reactions in the full pathway
