Difference between revisions of "SJ07699"

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(Created page with "Category:gene == Gene SJ08750 == * transcription-direction: ** negative * right-end-position: ** 46628 * left-end-position: ** 34257 * centisome-position: ** 68.83892...")
(Created page with "Category:gene == Gene SJ07699 == * transcription-direction: ** positive * right-end-position: ** 36626 * left-end-position: ** 30440 * centisome-position: ** 48.318993...")
 
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ08750 ==
+
== Gene SJ07699 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 46628
+
** 36626
 
* left-end-position:
 
* left-end-position:
−
** 34257
+
** 30440
 
* centisome-position:
 
* centisome-position:
−
** 68.83892    
+
** 48.318993    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[ATPASE-RXN]]
+
* [[QUERCETIN-3-O-METHYLTRANSFERASE-RXN]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-1104]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
+
* [[RXN-1143]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-12195]]
+
* [[RXN-13935]]
−
** Category: [[annotation]]
+
** Category: [[orthology]]
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
−
* [[RXN-12196]]
+
* [[RXN-3422]]
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN0-5462]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-7210]]
+
* [[PWY-7161]]
−
** '''8''' reactions found over '''8''' reactions in the full pathway
+
** '''1''' reactions found over '''9''' reactions in the full pathway
−
* [[PWY-7198]]
+
* [[PWY-6064]]
−
** '''6''' reactions found over '''7''' reactions in the full pathway
+
** '''1''' reactions found over '''2''' reactions in the full pathway
−
* [[PWY-7184]]
+
* [[PWY-2181]]
−
** '''9''' reactions found over '''9''' reactions in the full pathway
+
** '''3''' reactions found over '''4''' reactions in the full pathway
−
* [[PWY-6545]]
+
* [[PWY-7498]]
−
** '''8''' reactions found over '''9''' reactions in the full pathway
+
** '''2''' reactions found over '''10''' reactions in the full pathway
−
{{#set: transcription-direction=negative}}
+
* [[PWY-7186]]
−
{{#set: right-end-position=46628}}
+
** '''2''' reactions found over '''12''' reactions in the full pathway
−
{{#set: left-end-position=34257}}
+
* [[PWY-1121]]
−
{{#set: centisome-position=68.83892   }}
+
** '''9''' reactions found over '''20''' reactions in the full pathway
 +
* [[PWY-361]]
 +
** '''7''' reactions found over '''15''' reactions in the full pathway
 +
* [[PWY-5168]]
 +
** '''2''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-7163]]
 +
** '''1''' reactions found over '''4''' reactions in the full pathway
 +
{{#set: transcription-direction=positive}}
 +
{{#set: right-end-position=36626}}
 +
{{#set: left-end-position=30440}}
 +
{{#set: centisome-position=48.318993   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: nb reaction associated=5}}
 
{{#set: nb reaction associated=5}}
−
{{#set: nb pathway associated=4}}
+
{{#set: nb pathway associated=9}}

Latest revision as of 11:09, 18 March 2021

Gene SJ07699

  • transcription-direction:
    • positive
  • right-end-position:
    • 36626
  • left-end-position:
    • 30440
  • centisome-position:
    • 48.318993

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7161
    • 1 reactions found over 9 reactions in the full pathway
  • PWY-6064
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-2181
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-7498
    • 2 reactions found over 10 reactions in the full pathway
  • PWY-7186
    • 2 reactions found over 12 reactions in the full pathway
  • PWY-1121
    • 9 reactions found over 20 reactions in the full pathway
  • PWY-361
    • 7 reactions found over 15 reactions in the full pathway
  • PWY-5168
    • 2 reactions found over 4 reactions in the full pathway
  • PWY-7163
    • 1 reactions found over 4 reactions in the full pathway




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