Difference between revisions of "SJ07699"
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(Created page with "Category:gene == Gene SJ14691 == * transcription-direction: ** positive * right-end-position: ** 128470 * left-end-position: ** 123746 * centisome-position: ** 39.84044...") |
(Created page with "Category:gene == Gene SJ07699 == * transcription-direction: ** positive * right-end-position: ** 36626 * left-end-position: ** 30440 * centisome-position: ** 48.318993...") |
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Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
− | == Gene | + | == Gene SJ07699 == |
* transcription-direction: | * transcription-direction: | ||
** positive | ** positive | ||
* right-end-position: | * right-end-position: | ||
− | ** | + | ** 36626 |
* left-end-position: | * left-end-position: | ||
− | ** | + | ** 30440 |
* centisome-position: | * centisome-position: | ||
− | ** | + | ** 48.318993 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
− | * [[ | + | * [[QUERCETIN-3-O-METHYLTRANSFERASE-RXN]] |
+ | ** Category: [[orthology]] | ||
+ | *** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a | ||
+ | * [[RXN-1104]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[RXN-1143]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[RXN-13935]] | ||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a | *** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a | ||
− | *** source: [[ | + | * [[RXN-3422]] |
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
== Pathway(s) associated == | == Pathway(s) associated == | ||
− | * [[PWY- | + | * [[PWY-7161]] |
+ | ** '''1''' reactions found over '''9''' reactions in the full pathway | ||
+ | * [[PWY-6064]] | ||
+ | ** '''1''' reactions found over '''2''' reactions in the full pathway | ||
+ | * [[PWY-2181]] | ||
+ | ** '''3''' reactions found over '''4''' reactions in the full pathway | ||
+ | * [[PWY-7498]] | ||
+ | ** '''2''' reactions found over '''10''' reactions in the full pathway | ||
+ | * [[PWY-7186]] | ||
+ | ** '''2''' reactions found over '''12''' reactions in the full pathway | ||
+ | * [[PWY-1121]] | ||
+ | ** '''9''' reactions found over '''20''' reactions in the full pathway | ||
+ | * [[PWY-361]] | ||
+ | ** '''7''' reactions found over '''15''' reactions in the full pathway | ||
+ | * [[PWY-5168]] | ||
** '''2''' reactions found over '''4''' reactions in the full pathway | ** '''2''' reactions found over '''4''' reactions in the full pathway | ||
− | * [[PWY- | + | * [[PWY-7163]] |
− | ** '''1''' reactions found over ''' | + | ** '''1''' reactions found over '''4''' reactions in the full pathway |
− | |||
− | |||
− | |||
− | |||
{{#set: transcription-direction=positive}} | {{#set: transcription-direction=positive}} | ||
− | {{#set: right-end-position= | + | {{#set: right-end-position=36626}} |
− | {{#set: left-end-position= | + | {{#set: left-end-position=30440}} |
− | {{#set: centisome-position= | + | {{#set: centisome-position=48.318993 }} |
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
− | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=5}} |
− | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=9}} |
Latest revision as of 11:09, 18 March 2021
Contents
Gene SJ07699
- transcription-direction:
- positive
- right-end-position:
- 36626
- left-end-position:
- 30440
- centisome-position:
- 48.318993
Organism(s) associated with this gene
Reaction(s) associated
- QUERCETIN-3-O-METHYLTRANSFERASE-RXN
- Category: orthology
- source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
- Category: orthology
- RXN-1104
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-1143
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-13935
- Category: orthology
- source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
- Category: orthology
- RXN-3422
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
Pathway(s) associated
- PWY-7161
- 1 reactions found over 9 reactions in the full pathway
- PWY-6064
- 1 reactions found over 2 reactions in the full pathway
- PWY-2181
- 3 reactions found over 4 reactions in the full pathway
- PWY-7498
- 2 reactions found over 10 reactions in the full pathway
- PWY-7186
- 2 reactions found over 12 reactions in the full pathway
- PWY-1121
- 9 reactions found over 20 reactions in the full pathway
- PWY-361
- 7 reactions found over 15 reactions in the full pathway
- PWY-5168
- 2 reactions found over 4 reactions in the full pathway
- PWY-7163
- 1 reactions found over 4 reactions in the full pathway