Difference between revisions of "SJ07742"
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(Created page with "Category:gene == Gene SJ17350 == == Organism(s) associated with this gene == * S.japonica_carotenoid_curated == Reaction(s) associated == * RXN-12086 ** Category:...") |
(Created page with "Category:gene == Gene SJ12778 == * transcription-direction: ** positive * right-end-position: ** 63127 * left-end-position: ** 52326 * centisome-position: ** 13.607675...") |
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| Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
| − | == Gene | + | == Gene SJ12778 == |
| + | * transcription-direction: | ||
| + | ** positive | ||
| + | * right-end-position: | ||
| + | ** 63127 | ||
| + | * left-end-position: | ||
| + | ** 52326 | ||
| + | * centisome-position: | ||
| + | ** 13.607675 | ||
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
| − | * [[RXN | + | * [[3-DEHYDROSPHINGANINE-REDUCTASE-RXN]] |
| + | ** Category: [[annotation]] | ||
| + | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
| − | *** source: [[ | + | *** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a |
| − | * [[RXN- | + | * [[RXN-12642]] |
| − | ** Category: [[ | + | ** Category: [[annotation]] |
| − | *** source: [[ | + | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a |
| − | * [[ | + | * [[RXN-12645]] |
| − | ** Category: [[ | + | ** Category: [[annotation]] |
| − | *** source: [[ | + | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a |
== Pathway(s) associated == | == Pathway(s) associated == | ||
| − | * [[PWY- | + | * [[SPHINGOLIPID-SYN-PWY]] |
| − | ** ''' | + | ** '''4''' reactions found over '''11''' reactions in the full pathway |
| − | * [[ | + | * [[PWY-5129]] |
| − | ** '''2''' reactions found over ''' | + | ** '''4''' reactions found over '''13''' reactions in the full pathway |
| + | * [[PWY3DJ-12]] | ||
| + | ** '''2''' reactions found over '''4''' reactions in the full pathway | ||
| + | {{#set: transcription-direction=positive}} | ||
| + | {{#set: right-end-position=63127}} | ||
| + | {{#set: left-end-position=52326}} | ||
| + | {{#set: centisome-position=13.607675 }} | ||
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
{{#set: nb reaction associated=3}} | {{#set: nb reaction associated=3}} | ||
| − | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=3}} |
Revision as of 14:20, 26 August 2019
Contents
Gene SJ12778
- transcription-direction:
- positive
- right-end-position:
- 63127
- left-end-position:
- 52326
- centisome-position:
- 13.607675
Organism(s) associated with this gene
Reaction(s) associated
- 3-DEHYDROSPHINGANINE-REDUCTASE-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- Category: annotation
- RXN-12642
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-12645
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
Pathway(s) associated
- SPHINGOLIPID-SYN-PWY
- 4 reactions found over 11 reactions in the full pathway
- PWY-5129
- 4 reactions found over 13 reactions in the full pathway
- PWY3DJ-12
- 2 reactions found over 4 reactions in the full pathway
