Difference between revisions of "SJ07742"

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(Created page with "Category:gene == Gene SJ12778 == * transcription-direction: ** positive * right-end-position: ** 63127 * left-end-position: ** 52326 * centisome-position: ** 13.607675...")
(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=COBALT-SIROHYDROCHLORIN COBALT-SIROHYDROCHLORIN] == * common-name: ** cobalt-sirohydrochlorin *...")
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[[Category:gene]]
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[[Category:metabolite]]
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== Gene SJ12778 ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=COBALT-SIROHYDROCHLORIN COBALT-SIROHYDROCHLORIN] ==
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* transcription-direction:
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* common-name:
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** positive
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** cobalt-sirohydrochlorin
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* right-end-position:
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* smiles:
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** 63127
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** cc1(cc(=o)[o-])(c2(=cc5(c(ccc(=o)[o-])c(c)(cc(=o)[o-])c6(=cc4(=c(cc(=o)[o-])c(ccc(=o)[o-])=c3(c=c8(c(ccc(=o)[o-])=c(cc(=o)[o-])c7(c=c(c(ccc(=o)[o-])1)n2[co--](n34)([n+]=56)[n+]=78))))))))
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* left-end-position:
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* inchi-key:
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** 52326
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** xzmxjydtaininl-qiiswyhfsa-d
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* centisome-position:
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* molecular-weight:
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** 13.607675   
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** 911.694
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== Organism(s) associated with this gene  ==
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== Reaction(s) known to consume the compound ==
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* [[S.japonica_carotenoid_curated]]
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== Reaction(s) known to produce the compound ==
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== Reaction(s) associated ==
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* [[4.99.1.3-RXN]]
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* [[3-DEHYDROSPHINGANINE-REDUCTASE-RXN]]
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== Reaction(s) of unknown directionality ==
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** Category: [[annotation]]
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{{#set: common-name=cobalt-sirohydrochlorin}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: inchi-key=inchikey=xzmxjydtaininl-qiiswyhfsa-d}}
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** Category: [[orthology]]
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{{#set: molecular-weight=911.694}}
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*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
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* [[RXN-12642]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* [[RXN-12645]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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== Pathway(s) associated ==
 
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* [[SPHINGOLIPID-SYN-PWY]]
 
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** '''4''' reactions found over '''11''' reactions in the full pathway
 
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* [[PWY-5129]]
 
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** '''4''' reactions found over '''13''' reactions in the full pathway
 
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* [[PWY3DJ-12]]
 
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** '''2''' reactions found over '''4''' reactions in the full pathway
 
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{{#set: transcription-direction=positive}}
 
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{{#set: right-end-position=63127}}
 
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{{#set: left-end-position=52326}}
 
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{{#set: centisome-position=13.607675    }}
 
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{{#set: organism associated=S.japonica_carotenoid_curated}}
 
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{{#set: nb reaction associated=3}}
 
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{{#set: nb pathway associated=3}}
 

Revision as of 09:25, 27 August 2019

Metabolite COBALT-SIROHYDROCHLORIN

  • common-name:
    • cobalt-sirohydrochlorin
  • smiles:
    • cc1(cc(=o)[o-])(c2(=cc5(c(ccc(=o)[o-])c(c)(cc(=o)[o-])c6(=cc4(=c(cc(=o)[o-])c(ccc(=o)[o-])=c3(c=c8(c(ccc(=o)[o-])=c(cc(=o)[o-])c7(c=c(c(ccc(=o)[o-])1)n2[co--](n34)([n+]=56)[n+]=78))))))))
  • inchi-key:
    • xzmxjydtaininl-qiiswyhfsa-d
  • molecular-weight:
    • 911.694

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ07742&oldid=29351"