Difference between revisions of "SJ07743"

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(Created page with "Category:gene == Gene SJ12469 == * transcription-direction: ** negative * right-end-position: ** 229300 * left-end-position: ** 207110 * centisome-position: ** 27.633825...")
(Created page with "Category:gene == Gene SJ07743 == * transcription-direction: ** positive * right-end-position: ** 812751 * left-end-position: ** 805273 * centisome-position: ** 90.998604...")
 
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ12469 ==
+
== Gene SJ07743 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 229300
+
** 812751
 
* left-end-position:
 
* left-end-position:
−
** 207110
+
** 805273
 
* centisome-position:
 
* centisome-position:
−
** 27.633825    
+
** 90.998604    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[RIB5PISOM-RXN]]
−
* [[3.6.4.5-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[ATPASE-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-12195]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-12196]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN0-5462]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
−
</div>
+
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-7210]]
+
* [[P124-PWY]]
−
** '''8''' reactions found over '''8''' reactions in the full pathway
+
** '''12''' reactions found over '''15''' reactions in the full pathway
−
* [[PWY-7198]]
+
* [[P185-PWY]]
−
** '''6''' reactions found over '''7''' reactions in the full pathway
+
** '''11''' reactions found over '''12''' reactions in the full pathway
−
* [[PWY-7184]]
+
* [[NONOXIPENT-PWY]]
−
** '''9''' reactions found over '''9''' reactions in the full pathway
+
** '''5''' reactions found over '''5''' reactions in the full pathway
−
* [[PWY-6545]]
+
* [[PWY-5723]]
−
** '''8''' reactions found over '''9''' reactions in the full pathway
+
** '''10''' reactions found over '''10''' reactions in the full pathway
−
{{#set: transcription-direction=negative}}
+
* [[CALVIN-PWY]]
−
{{#set: right-end-position=229300}}
+
** '''12''' reactions found over '''13''' reactions in the full pathway
−
{{#set: left-end-position=207110}}
+
* [[PWY-1861]]
−
{{#set: centisome-position=27.633825   }}
+
** '''7''' reactions found over '''9''' reactions in the full pathway
 +
{{#set: transcription-direction=positive}}
 +
{{#set: right-end-position=812751}}
 +
{{#set: left-end-position=805273}}
 +
{{#set: centisome-position=90.998604   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=6}}
+
{{#set: nb reaction associated=1}}
−
{{#set: nb pathway associated=4}}
+
{{#set: nb pathway associated=6}}

Latest revision as of 11:01, 18 March 2021

Gene SJ07743

  • transcription-direction:
    • positive
  • right-end-position:
    • 812751
  • left-end-position:
    • 805273
  • centisome-position:
    • 90.998604

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • P124-PWY
    • 12 reactions found over 15 reactions in the full pathway
  • P185-PWY
    • 11 reactions found over 12 reactions in the full pathway
  • NONOXIPENT-PWY
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-5723
    • 10 reactions found over 10 reactions in the full pathway
  • CALVIN-PWY
    • 12 reactions found over 13 reactions in the full pathway
  • PWY-1861
    • 7 reactions found over 9 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ07743&oldid=132140"