Difference between revisions of "SJ07752"

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(Created page with "Category:gene == Gene SJ07216 == * transcription-direction: ** negative * right-end-position: ** 934053 * left-end-position: ** 926385 * centisome-position: ** 63.404297...")
(Created page with "Category:gene == Gene SJ07752 == * transcription-direction: ** positive * right-end-position: ** 355429 * left-end-position: ** 337285 * centisome-position: ** 75.1796...")
 
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ07216 ==
+
== Gene SJ07752 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 934053
+
** 355429
 
* left-end-position:
 
* left-end-position:
−
** 926385
+
** 337285
 
* centisome-position:
 
* centisome-position:
−
** 63.404297    
+
** 75.1796    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
−
* [[S.japonica_sterols_curated]]
+
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[ACETYLORNTRANSAM-RXN]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* [[3.1.1.23-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
* [[3.1.1.64-RXN]]
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[ALANINE--GLYOXYLATE-AMINOTRANSFERASE-RXN]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-15007]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
* [[CARBOXYLESTERASE-RXN]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[SUCCINYLDIAMINOPIMTRANS-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[LYSOPHOSPHOLIPASE-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RETINYL-PALMITATE-ESTERASE-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-10711]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-10767]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-12252]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-12575]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-15035]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-15088]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-15089]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXNQT-4366]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
</div>
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[GLUTORN-PWY]]
+
* [[LIPAS-PWY]]
−
** '''5''' reactions found over '''5''' reactions in the full pathway
+
** '''2''' reactions found over '''3''' reactions in the full pathway
−
* [[ARGSYNBSUB-PWY]]
+
* [[PWY-6303]]
−
** '''9''' reactions found over '''9''' reactions in the full pathway
+
** '''1''' reactions found over '''2''' reactions in the full pathway
−
* [[PWY-5154]]
+
* [[PWY-6857]]
−
** '''8''' reactions found over '''9''' reactions in the full pathway
+
** '''3''' reactions found over '''7''' reactions in the full pathway
−
* [[GLYSYN-ALA-PWY]]
+
* [[PWY-7409]]
−
** '''1''' reactions found over '''1''' reactions in the full pathway
+
** '''4''' reactions found over '''4''' reactions in the full pathway
−
* [[PWY-7400]]
+
* [[PWY-7420]]
−
** '''7''' reactions found over '''9''' reactions in the full pathway
+
** '''4''' reactions found over '''4''' reactions in the full pathway
−
* [[DAPLYSINESYN-PWY]]
+
{{#set: transcription-direction=positive}}
−
** '''7''' reactions found over '''9''' reactions in the full pathway
+
{{#set: right-end-position=355429}}
−
{{#set: transcription-direction=negative}}
+
{{#set: left-end-position=337285}}
−
{{#set: right-end-position=934053}}
+
{{#set: centisome-position=75.1796   }}
−
{{#set: left-end-position=926385}}
+
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: centisome-position=63.404297   }}
+
{{#set: nb reaction associated=13}}
−
{{#set: organism associated=S.japonica_sterols_curated}}
+
{{#set: nb pathway associated=5}}
−
{{#set: nb reaction associated=4}}
 
−
{{#set: nb pathway associated=6}}
 

Latest revision as of 11:04, 18 March 2021

Gene SJ07752

  • transcription-direction:
    • positive
  • right-end-position:
    • 355429
  • left-end-position:
    • 337285
  • centisome-position:
    • 75.1796

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • LIPAS-PWY
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-6303
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-6857
    • 3 reactions found over 7 reactions in the full pathway
  • PWY-7409
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-7420
    • 4 reactions found over 4 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ07752&oldid=133625"